RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 N4BP3O15049 544 aa19.37■□□□□ 0.69
COL7A1-206ENST00000466591 SPATA31C1P0DKV0 1188 aa19.37■□□□□ 0.69
COL7A1-206ENST00000466591 SIGLEC14Q08ET2 396 aa19.37■□□□□ 0.69
COL7A1-206ENST00000466591 MTMR3Q13615 1198 aa19.37■□□□□ 0.69
COL7A1-206ENST00000466591 APBB1IPQ7Z5R6 666 aaPredicted RBP19.37■□□□□ 0.69
COL7A1-206ENST00000466591 KLHL5Q96PQ7 755 aa19.37■□□□□ 0.69
COL7A1-206ENST00000466591 HERC2P3Q9BVR0 1158 aa19.37■□□□□ 0.69
COL7A1-206ENST00000466591 KCNH6Q9H252 994 aa19.37■□□□□ 0.69
COL7A1-206ENST00000466591 B4GALT3O60512 393 aa19.36■□□□□ 0.69
COL7A1-206ENST00000466591 TADA2AO75478 443 aa19.36■□□□□ 0.69
COL7A1-206ENST00000466591 CNPP09543 421 aaKnown RBP19.36■□□□□ 0.69
COL7A1-206ENST00000466591 GRIK3Q13003 919 aa19.36■□□□□ 0.69
COL7A1-206ENST00000466591 CCDC149Q6ZUS6 474 aa19.36■□□□□ 0.69
COL7A1-206ENST00000466591 COLGALT2Q8IYK4 626 aa19.36■□□□□ 0.69
COL7A1-206ENST00000466591 KREMEN2Q8NCW0 462 aa19.36■□□□□ 0.69
COL7A1-206ENST00000466591 SNX29Q8TEQ0 813 aa19.36■□□□□ 0.69
COL7A1-206ENST00000466591 C2CD4DB7Z1M9 353 aa19.35■□□□□ 0.69
COL7A1-206ENST00000466591 H3BQV1 296 aa19.35■□□□□ 0.69
COL7A1-206ENST00000466591 GLUD1P00367 558 aa19.35■□□□□ 0.69
COL7A1-206ENST00000466591 PRKCBP05771 671 aa19.35■□□□□ 0.69
COL7A1-206ENST00000466591 ZRSR1Q15695 479 aaKnown RBP19.35■□□□□ 0.69
COL7A1-206ENST00000466591 AMHR2Q16671 573 aa19.35■□□□□ 0.69
COL7A1-206ENST00000466591 KRT79Q5XKE5 535 aa19.35■□□□□ 0.69
COL7A1-206ENST00000466591 PLCD3Q8N3E9 789 aa19.35■□□□□ 0.69
COL7A1-206ENST00000466591 SLC22A17Q8WUG5 538 aa19.35■□□□□ 0.69
COL7A1-206ENST00000466591 VN1R3Q9BXE9 311 aa19.35■□□□□ 0.69
COL7A1-206ENST00000466591 BHMT2Q9H2M3 363 aa19.35■□□□□ 0.69
COL7A1-206ENST00000466591 MAN1C1Q9NR34 630 aa19.35■□□□□ 0.69
COL7A1-206ENST00000466591 SORCS3Q9UPU3 1222 aa19.35■□□□□ 0.69
COL7A1-206ENST00000466591 KIAA1024Q9UPX6 916 aa19.35■□□□□ 0.69
COL7A1-206ENST00000466591 A0A1B0GUA9 196 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 CYP11B2P19099 503 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 MUTP22033 750 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 NAMPTP43490 491 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 CLCN4P51793 760 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 CREMQ03060 361 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 NBR1Q14596 966 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 RABEP1Q15276 862 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 KANK3Q6NY19 840 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 UBALD2Q8IYN6 164 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 FBXL6Q8N531 539 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 KIFAP3Q92845 792 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 MFSD1Q9H3U5 465 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 PIDD1Q9HB75 910 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 DDX19AQ9NUU7 478 aaKnown RBP19.34■□□□□ 0.69
COL7A1-206ENST00000466591 MARCH5Q9NX47 278 aa19.34■□□□□ 0.69
COL7A1-206ENST00000466591 CCDC169A6NNP5 214 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 MYBP10242 640 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 FXR2P51116 673 aaKnown RBP eCLIP19.33■□□□□ 0.68
COL7A1-206ENST00000466591 EFNA5P52803 228 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 PTGDRQ13258 359 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 USP41Q3LFD5 358 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 CDCA2Q69YH5 1023 aaPredicted RBP19.33■□□□□ 0.68
COL7A1-206ENST00000466591 PPP4R3CPQ6ZMV5 832 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 OTOP3Q7RTS5 596 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 BMP8AQ7Z5Y6 402 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 GLYCTKQ8IVS8 523 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 PRRX2Q99811 253 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.33■□□□□ 0.68
COL7A1-206ENST00000466591 MIOSQ9NXC5 875 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 SNTG2Q9NY99 539 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 LIMD1Q9UGP4 676 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 ADAM28Q9UKQ2 775 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 DNM3Q9UQ16 869 aa19.33■□□□□ 0.68
COL7A1-206ENST00000466591 SF3B1O75533 1304 aaKnown RBP eCLIP19.32■□□□□ 0.68
COL7A1-206ENST00000466591 LAD1O00515 517 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 DSC1Q08554 894 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 HSP90AA2PQ14568 343 aaPredicted RBP19.32■□□□□ 0.68
COL7A1-206ENST00000466591 DCAF4L1Q3SXM0 396 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 FUT10Q6P4F1 479 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 DTHD1Q6ZMT9 781 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 GPR149Q86SP6 731 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 PALB2Q86YC2 1186 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 RIN2Q8WYP3 895 aaPredicted RBP19.32■□□□□ 0.68
COL7A1-206ENST00000466591 RABGGTAQ92696 567 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 STAMQ92783 540 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 CDK5RAP3Q96JB5 506 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 USTQ9Y2C2 406 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 GDAQ9Y2T3 454 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 C5orf42Q9H799 3197 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 ZMYM2Q9UBW7 1377 aa19.32■□□□□ 0.68
COL7A1-206ENST00000466591 TDRD15B5MCY1 1934 aaKnown RBP19.31■□□□□ 0.68
COL7A1-206ENST00000466591 CASTOR2A6NHX0 329 aa19.31■□□□□ 0.68
COL7A1-206ENST00000466591 INPPL1O15357 1258 aa19.31■□□□□ 0.68
COL7A1-206ENST00000466591 TEX28O15482 410 aa19.31■□□□□ 0.68
COL7A1-206ENST00000466591 THP07101 528 aa19.31■□□□□ 0.68
COL7A1-206ENST00000466591 FAM187BQ17R55 369 aa19.31■□□□□ 0.68
COL7A1-206ENST00000466591 C8orf34Q49A92 452 aa19.31■□□□□ 0.68
COL7A1-206ENST00000466591 TAS1R1Q7RTX1 841 aa19.31■□□□□ 0.68
COL7A1-206ENST00000466591 CEP57Q86XR8 500 aa19.31■□□□□ 0.68
COL7A1-206ENST00000466591 B3GALT6Q96L58 329 aa19.31■□□□□ 0.68
COL7A1-206ENST00000466591 KIFC3Q9BVG8 833 aa19.31■□□□□ 0.68
COL7A1-206ENST00000466591 FZD8Q9H461 694 aa19.31■□□□□ 0.68
COL7A1-206ENST00000466591 PDZD7Q9H5P4 517 aa19.31■□□□□ 0.68
COL7A1-206ENST00000466591 CCDC195A0A1B0GUA6 201 aa19.3■□□□□ 0.68
COL7A1-206ENST00000466591 K7ERI5 159 aa19.3■□□□□ 0.68
COL7A1-206ENST00000466591 ACKR2O00590 384 aa19.3■□□□□ 0.68
COL7A1-206ENST00000466591 RECQL4O94761 1208 aa19.3■□□□□ 0.68
COL7A1-206ENST00000466591 ASGR2P07307 311 aa19.3■□□□□ 0.68
COL7A1-206ENST00000466591 GBP2P32456 591 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms