RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 MLH1P40692 756 aa15.01□□□□□ -0.01
CHD3-207ENST00000466233 TRAPPC10P48553 1259 aa15.01□□□□□ -0.01
CHD3-207ENST00000466233 USP41Q3LFD5 358 aa15.01□□□□□ -0.01
CHD3-207ENST00000466233 TMC5Q6UXY8 1006 aa15.01□□□□□ -0.01
CHD3-207ENST00000466233 CATSPER3Q86XQ3 398 aa15.01□□□□□ -0.01
CHD3-207ENST00000466233 C12orf76Q8N812 135 aaPredicted RBP15.01□□□□□ -0.01
CHD3-207ENST00000466233 NECAB1Q8N987 351 aa15.01□□□□□ -0.01
CHD3-207ENST00000466233 ASAP3Q8TDY4 903 aa15.01□□□□□ -0.01
CHD3-207ENST00000466233 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
CHD3-207ENST00000466233 FOXP1Q9H334 677 aaPredicted RBP15.01□□□□□ -0.01
CHD3-207ENST00000466233 ZDHHC7Q9NXF8 308 aa15.01□□□□□ -0.01
CHD3-207ENST00000466233 LIMD1Q9UGP4 676 aa15.01□□□□□ -0.01
CHD3-207ENST00000466233 OR1G1P47890 313 aa15□□□□□ -0.01
CHD3-207ENST00000466233 TDGQ13569 410 aa15□□□□□ -0.01
CHD3-207ENST00000466233 PPP2R5AQ15172 486 aa15□□□□□ -0.01
CHD3-207ENST00000466233 ASTLQ6HA08 431 aaPredicted RBP15□□□□□ -0.01
CHD3-207ENST00000466233 RTL10Q7L3V2 364 aa15□□□□□ -0.01
CHD3-207ENST00000466233 ZBTB8OSQ8IWT0 167 aa15□□□□□ -0.01
CHD3-207ENST00000466233 POLR3FQ9H1D9 316 aaPredicted RBP15□□□□□ -0.01
CHD3-207ENST00000466233 WDR6Q9NNW5 1121 aaKnown RBP15□□□□□ -0.01
CHD3-207ENST00000466233 EPS15L1Q9UBC2 864 aa15□□□□□ -0.01
CHD3-207ENST00000466233 ADAM28Q9UKQ2 775 aa15□□□□□ -0.01
CHD3-207ENST00000466233 LIMCH1Q9UPQ0 1083 aa15□□□□□ -0.01
CHD3-207ENST00000466233 N4BP3O15049 544 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 ST18O60284 1047 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 LARGE1O95461 756 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 CYP11B2P19099 503 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 SCNN1GP51170 649 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 EFNA5P52803 228 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 VCPP55072 806 aaKnown RBP14.99□□□□□ -0.01
CHD3-207ENST00000466233 HMGN5P82970 282 aaKnown RBP14.99□□□□□ -0.01
CHD3-207ENST00000466233 PDIA5Q14554 519 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 HAUS3Q68CZ6 603 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 PDXDC1Q6P996 788 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 LILRA6Q6PI73 481 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 PIGOQ8TEQ8 1089 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 CPB2Q96IY4 423 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 ZFP42Q96MM3 310 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 MAN1C1Q9NR34 630 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 BMP2KQ9NSY1 1161 aaPredicted RBP14.99□□□□□ -0.01
CHD3-207ENST00000466233 MIOSQ9NXC5 875 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.99□□□□□ -0.01
CHD3-207ENST00000466233 CDH22Q9UJ99 828 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 DUSP12Q9UNI6 340 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 PRG3Q9Y2Y8 225 aaPredicted RBP14.99□□□□□ -0.01
CHD3-207ENST00000466233 HES2Q9Y543 173 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 ZFP37Q9Y6Q3 630 aaPredicted RBP14.99□□□□□ -0.01
CHD3-207ENST00000466233 CACNA1HO95180 2353 aa14.99□□□□□ -0.01
CHD3-207ENST00000466233 PHLPP2Q6ZVD8 1323 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 KMT2EQ8IZD2 1858 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 CCDC195A0A1B0GUA6 201 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 POTEMA6NI47 508 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 SPDYE4A6NLX3 237 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 ACKR2O00590 384 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 ATP2B1P20020 1258 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 NAMPTP43490 491 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 RBM25P49756 843 aaKnown RBP14.98□□□□□ -0.01
CHD3-207ENST00000466233 ELAVL2Q12926 359 aaKnown RBP14.98□□□□□ -0.01
CHD3-207ENST00000466233 TUSC3Q13454 348 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 MAPK6Q16659 721 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 FUT10Q6P4F1 479 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 FBXO18Q8NFZ0 1043 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 ZSCAN31Q96LW9 406 aaPredicted RBP14.98□□□□□ -0.01
CHD3-207ENST00000466233 ADPGKQ9BRR6 497 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 TMEM60Q9H2L4 133 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 NXF3Q9H4D5 531 aaKnown RBP14.98□□□□□ -0.01
CHD3-207ENST00000466233 KCNK12Q9HB15 430 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 WNT16Q9UBV4 365 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 ARID2Q68CP9 1835 aa14.98□□□□□ -0.01
CHD3-207ENST00000466233 SF3B1O75533 1304 aaKnown RBP eCLIP14.97□□□□□ -0.01
CHD3-207ENST00000466233 LRRIQ4A6NIV6 560 aa14.97□□□□□ -0.01
CHD3-207ENST00000466233 WNT7AO00755 349 aa14.97□□□□□ -0.01
CHD3-207ENST00000466233 JAK2O60674 1132 aa14.97□□□□□ -0.01
CHD3-207ENST00000466233 USO1O60763 962 aaKnown RBP14.97□□□□□ -0.01
CHD3-207ENST00000466233 SSBP05455 408 aaKnown RBP eCLIP14.97□□□□□ -0.01
CHD3-207ENST00000466233 POU2F2P09086 479 aa14.97□□□□□ -0.01
CHD3-207ENST00000466233 WEE2P0C1S8 567 aa14.97□□□□□ -0.01
CHD3-207ENST00000466233 OR52Z1P0C646 297 aa14.97□□□□□ -0.01
CHD3-207ENST00000466233 SP100P23497 879 aaPredicted RBP14.97□□□□□ -0.01
CHD3-207ENST00000466233 MCM7P33993 719 aa14.97□□□□□ -0.01
CHD3-207ENST00000466233 FXR2P51116 673 aaKnown RBP eCLIP14.97□□□□□ -0.01
CHD3-207ENST00000466233 TAS1R1Q7RTX1 841 aa14.97□□□□□ -0.01
CHD3-207ENST00000466233 APBB1IPQ7Z5R6 666 aaPredicted RBP14.97□□□□□ -0.01
CHD3-207ENST00000466233 KCTD17Q8N5Z5 321 aa14.97□□□□□ -0.01
CHD3-207ENST00000466233 C8orf76Q96K31 380 aa14.97□□□□□ -0.01
CHD3-207ENST00000466233 NT5C3AQ9H0P0 336 aa14.97□□□□□ -0.01
CHD3-207ENST00000466233 SH2B1Q9NRF2 756 aaPredicted RBP14.97□□□□□ -0.01
CHD3-207ENST00000466233 DENND4AQ7Z401 1863 aa14.97□□□□□ -0.01
CHD3-207ENST00000466233 LAD1O00515 517 aa14.96□□□□□ -0.01
CHD3-207ENST00000466233 B4GALT5O43286 388 aa14.96□□□□□ -0.01
CHD3-207ENST00000466233 MED24O75448 989 aa14.96□□□□□ -0.01
CHD3-207ENST00000466233 TADA2AO75478 443 aa14.96□□□□□ -0.01
CHD3-207ENST00000466233 NPTXRO95502 500 aa14.96□□□□□ -0.01
CHD3-207ENST00000466233 THP07101 528 aa14.96□□□□□ -0.01
CHD3-207ENST00000466233 ASGR2P07307 311 aa14.96□□□□□ -0.01
CHD3-207ENST00000466233 AKAP5P24588 427 aa14.96□□□□□ -0.01
CHD3-207ENST00000466233 HOXA9P31269 272 aa14.96□□□□□ -0.01
CHD3-207ENST00000466233 PRPF4BQ13523 1007 aaKnown RBP14.96□□□□□ -0.01
CHD3-207ENST00000466233 HSP90AA2PQ14568 343 aaPredicted RBP14.96□□□□□ -0.01
CHD3-207ENST00000466233 DCAF4L1Q3SXM0 396 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms