RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 SPDYE7PQ495Y7 208 aa3.33□□□□□ -1.88
CCDC93-205ENST00000466171 BOLLQ8N9W6 283 aaKnown RBP3.33□□□□□ -1.88
CCDC93-205ENST00000466171 ZFP28Q8NHY6 868 aa3.33□□□□□ -1.88
CCDC93-205ENST00000466171 TFAP2CQ92754 450 aa3.33□□□□□ -1.88
CCDC93-205ENST00000466171 PAWRQ96IZ0 340 aaKnown RBP3.33□□□□□ -1.88
CCDC93-205ENST00000466171 ORAI3Q9BRQ5 295 aa3.33□□□□□ -1.88
CCDC93-205ENST00000466171 INO80BQ9C086 356 aaPredicted RBP3.33□□□□□ -1.88
CCDC93-205ENST00000466171 DKK2Q9UBU2 259 aa3.33□□□□□ -1.88
CCDC93-205ENST00000466171 TLK1Q9UKI8 766 aa3.33□□□□□ -1.88
CCDC93-205ENST00000466171 FPGT-TNNI3KV9GXZ4 949 aa3.33□□□□□ -1.88
CCDC93-205ENST00000466171 A0A1W2PR48 441 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 UNC119BA6NIH7 251 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 TBKBP1A7MCY6 615 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 PRAMEF4O60810 478 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 RFPL3O75679 317 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 ESRRBO95718 433 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 FOSP01100 380 aaPredicted RBP3.32□□□□□ -1.88
CCDC93-205ENST00000466171 ERBB2P04626 1255 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 PFKMP08237 780 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 ATP2A2P16615 1042 aaKnown RBP3.32□□□□□ -1.88
CCDC93-205ENST00000466171 LSP1P33241 339 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 PTTG1IPP53801 180 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 KRTAP10-11P60412 298 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 MEF2AQ02078 507 aaPredicted RBP3.32□□□□□ -1.88
CCDC93-205ENST00000466171 PPARAQ07869 468 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 FOXI1Q12951 378 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 UBE3CQ15386 1083 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 SF3A1Q15459 793 aaKnown RBP3.32□□□□□ -1.88
CCDC93-205ENST00000466171 PDCD4Q53EL6 469 aaKnown RBP3.32□□□□□ -1.88
CCDC93-205ENST00000466171 GPR158Q5T848 1215 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 CREB3L3Q68CJ9 461 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 MSL3Q8N5Y2 521 aaKnown RBP3.32□□□□□ -1.88
CCDC93-205ENST00000466171 SIMC1Q8NDZ2 872 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 DUSP26Q9BV47 211 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 REXO4Q9GZR2 422 aaKnown RBP3.32□□□□□ -1.88
CCDC93-205ENST00000466171 WNT8AQ9H1J5 351 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 THG1LQ9NWX6 298 aaKnown RBP3.32□□□□□ -1.88
CCDC93-205ENST00000466171 H2AFY2Q9P0M6 372 aaPredicted RBP3.32□□□□□ -1.88
CCDC93-205ENST00000466171 TESQ9UGI8 421 aaKnown RBP3.32□□□□□ -1.88
CCDC93-205ENST00000466171 ATP11BQ9Y2G3 1177 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 NUMBLQ9Y6R0 609 aa3.32□□□□□ -1.88
CCDC93-205ENST00000466171 RAB11FIP3O75154 756 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 CDKL5O76039 1030 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 F2P00734 622 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 GASTP01350 101 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 EGR2P11161 476 aaPredicted RBP3.31□□□□□ -1.88
CCDC93-205ENST00000466171 ITGAMP11215 1152 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 SDSP20132 328 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 NEK4P51957 841 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 RESTQ13127 1097 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 PABPC4Q13310 644 aaKnown RBP eCLIP3.31□□□□□ -1.88
CCDC93-205ENST00000466171 TP53BP2Q13625 1128 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 C19orf54Q5BKX5 351 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 ZBTB41Q5SVQ8 909 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 GLCCI1Q86VQ1 547 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 SYNPOQ8N3V7 929 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 CHTF18Q8WVB6 975 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 MRFAP1L1Q96HT8 127 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 FDXACB1Q9BRP7 624 aaPredicted RBP3.31□□□□□ -1.88
CCDC93-205ENST00000466171 OSBPL2Q9H1P3 480 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 KIAA1586Q9HCI6 787 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 USP15Q9Y4E8 981 aaPredicted RBP3.31□□□□□ -1.88
CCDC93-205ENST00000466171 NOX1Q9Y5S8 564 aa3.31□□□□□ -1.88
CCDC93-205ENST00000466171 ZNF185O15231 689 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 KPNA6O60684 536 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 SPDEFO95238 335 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 ASMTLO95671 621 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 FDXRP22570 491 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 DSG1Q02413 1049 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 BMT2Q1RMZ1 405 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 SP5Q6BEB4 398 aaPredicted RBP3.3□□□□□ -1.88
CCDC93-205ENST00000466171 BHLHA9Q7RTU4 235 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 C11orf74Q86VG3 221 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 SYT12Q8IV01 421 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 NXPE1Q8N323 547 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 SLC44A3Q8N4M1 653 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 ZNF610Q8N9Z0 462 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 OR14C36Q8NHC7 312 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 ASB10Q8WXI3 467 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 ZNF496Q96IT1 587 aaPredicted RBP3.3□□□□□ -1.88
CCDC93-205ENST00000466171 CDK11AQ9UQ88 783 aaPredicted RBP3.3□□□□□ -1.88
CCDC93-205ENST00000466171 MAP3K2Q9Y2U5 619 aa3.3□□□□□ -1.88
CCDC93-205ENST00000466171 SETD1BQ9UPS6 1966 aaKnown RBP3.3□□□□□ -1.88
CCDC93-205ENST00000466171 COL11A2P13942 1736 aaPredicted RBP3.3□□□□□ -1.88
CCDC93-205ENST00000466171 ZMYM3Q14202 1370 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 MAST3O60307 1309 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 PRSS38A1L453 326 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 PPP1R12AO14974 1030 aaPredicted RBP3.29□□□□□ -1.88
CCDC93-205ENST00000466171 PHF2O75151 1096 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 ITGA10O75578 1167 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 SNRPA1P09661 255 aaKnown RBP3.29□□□□□ -1.88
CCDC93-205ENST00000466171 PLA2G5P39877 138 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 MPLP40238 635 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 FLT3LGP49771 235 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 SCNN1BP51168 640 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 PHC1P78364 1004 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 ATXN7L2Q5T6C5 722 aaPredicted RBP3.29□□□□□ -1.88
CCDC93-205ENST00000466171 FAM102AQ5T9C2 384 aaPredicted RBP3.29□□□□□ -1.88
CCDC93-205ENST00000466171 ANKS6Q68DC2 871 aa3.29□□□□□ -1.88
CCDC93-205ENST00000466171 FRMD7Q6ZUT3 714 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms