RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 TBX20Q9UMR3 447 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 TNFSF13BQ9Y275 285 aa13.59□□□□□ -0.23
CHPF2-202ENST00000465601 ZNF202O95125 648 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 GTF2BQ00403 316 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 COASYQ13057 564 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 ADGRE1Q14246 886 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 DCAF4L1Q3SXM0 396 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 NOMO2Q5JPE7 1267 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 CNNM4Q6P4Q7 775 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 HACE1Q8IYU2 909 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 SLC17A8Q8NDX2 589 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 GDPD5Q8WTR4 605 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 KCNN1Q92952 543 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 HPS3Q969F9 1004 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 GAD1Q99259 594 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 CDT1Q9H211 546 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 ST6GALNAC4Q9H4F1 302 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 UBN1Q9NPG3 1134 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 KLK14Q9P0G3 267 aa13.58□□□□□ -0.24
CHPF2-202ENST00000465601 ARL5CA6NH57 179 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 ABLIM1O14639 778 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 TOM1L1O75674 476 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 GCNT3O95395 438 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 POMCP01189 267 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 MYBP10242 640 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 HARSP12081 509 aaKnown RBP13.57□□□□□ -0.24
CHPF2-202ENST00000465601 SCP2P22307 547 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 IGFBP4P22692 258 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 PROZP22891 400 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 MATR3P43243 847 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHPF2-202ENST00000465601 CSPP1Q1MSJ5 1256 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 ZNF568Q3ZCX4 644 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 MPZL3Q6UWV2 235 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 ZPBP2Q6X784 338 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 KRBA2Q6ZNG9 492 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 APBB1IPQ7Z5R6 666 aaPredicted RBP13.57□□□□□ -0.24
CHPF2-202ENST00000465601 LRRC43Q8N309 656 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 CEP120Q8N960 986 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 URGCPQ8TCY9 931 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 ZFP42Q96MM3 310 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 GAS2L1Q99501 681 aaPredicted RBP13.57□□□□□ -0.24
CHPF2-202ENST00000465601 MRPL9Q9BYD2 267 aaKnown RBP13.57□□□□□ -0.24
CHPF2-202ENST00000465601 FGFBP2Q9BYJ0 223 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 GBP3Q9H0R5 595 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 OLFML3Q9NRN5 406 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 TBC1D13Q9NVG8 400 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 MIOSQ9NXC5 875 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 ANKFY1Q9P2R3 1169 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 GDAQ9Y2T3 454 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 GIT1Q9Y2X7 761 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 RWDD3Q9Y3V2 267 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 COL6A3P12111 3177 aa13.57□□□□□ -0.24
CHPF2-202ENST00000465601 H3BNC9 293 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 LPXNO60711 386 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 GADD45BO75293 160 aaPredicted RBP13.56□□□□□ -0.24
CHPF2-202ENST00000465601 PPP1R37O75864 691 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 PRPF6O94906 941 aaKnown RBP13.56□□□□□ -0.24
CHPF2-202ENST00000465601 RB1P06400 928 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 MCF2P10911 925 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 FOSL2P15408 326 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 PBX3P40426 434 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 MLH1P40692 756 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 LIG4P49917 911 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 SCNN1GP51170 649 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 CASP5P51878 434 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 OSTNP61366 133 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 RNASELQ05823 741 aaKnown RBP13.56□□□□□ -0.24
CHPF2-202ENST00000465601 KCNA1Q09470 495 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 GPM6BQ13491 265 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 UNC13DQ70J99 1090 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 ZNF280BQ86YH2 543 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 MAP4K3Q8IVH8 894 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 THNSL1Q8IYQ7 743 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 FMR1NBQ8N0W7 255 aaPredicted RBP13.56□□□□□ -0.24
CHPF2-202ENST00000465601 KLHL23Q8NBE8 558 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 COLGALT1Q8NBJ5 622 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 GLIS3Q8NEA6 775 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 STRA6Q9BX79 667 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 PLVAPQ9BX97 442 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 HAPLN2Q9GZV7 340 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 CXCL16Q9H2A7 254 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 IKZF4Q9H2S9 585 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 NRDE2Q9H7Z3 1164 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 AAASQ9NRG9 546 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 KANSL3Q9P2N6 904 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 PCDHB13Q9Y5F0 798 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 PCDHB12Q9Y5F1 795 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 PRUNE2Q8WUY3 3088 aa13.56□□□□□ -0.24
CHPF2-202ENST00000465601 PLXNA4Q9HCM2 1894 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 PVALEFA0A1B0GWK0 134 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 TISP43B9A030 160 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 ANKRD63C9JTQ0 380 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 C5orf67F2Z3F1 127 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 HNRNPDLO14979 420 aaKnown RBP13.55□□□□□ -0.24
CHPF2-202ENST00000465601 CLDN3O15551 220 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 GTPBP6O43824 516 aaPredicted RBP13.55□□□□□ -0.24
CHPF2-202ENST00000465601 KLRC4O43908 158 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 B4GALT3O60512 393 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 RECQL4O94761 1208 aa13.55□□□□□ -0.24
CHPF2-202ENST00000465601 DDHD2O94830 711 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms