RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 FIBCD1Q8N539 461 aa20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 GLIS3Q8NEA6 775 aa20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 URGCPQ8TCY9 931 aa20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 RPS6KC1Q96S38 1066 aa20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 CCDC94Q9BW85 323 aaPredicted RBP20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 CDT1Q9H211 546 aa20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 TMEM206Q9H813 350 aa20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 RSAD1Q9HA92 442 aa20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 RMND1Q9NWS8 449 aa20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 LCHNA4D1U4 455 aa20.25■□□□□ 0.83
SCAMP3-204ENST00000465312 ZNF623O75123 536 aa20.25■□□□□ 0.83
SCAMP3-204ENST00000465312 ATF7P17544 494 aaPredicted RBP20.25■□□□□ 0.83
SCAMP3-204ENST00000465312 RNASELQ05823 741 aaKnown RBP20.25■□□□□ 0.83
SCAMP3-204ENST00000465312 KCNA1Q09470 495 aa20.25■□□□□ 0.83
SCAMP3-204ENST00000465312 PSMD2Q13200 908 aa20.25■□□□□ 0.83
SCAMP3-204ENST00000465312 SMG8Q8ND04 991 aaKnown RBP20.25■□□□□ 0.83
SCAMP3-204ENST00000465312 TMEM117Q9H0C3 514 aa20.25■□□□□ 0.83
SCAMP3-204ENST00000465312 SNTG2Q9NY99 539 aa20.25■□□□□ 0.83
SCAMP3-204ENST00000465312 MTUS1Q9ULD2 1270 aa20.25■□□□□ 0.83
SCAMP3-204ENST00000465312 MEIS3P2A8K0S8 358 aa20.24■□□□□ 0.83
SCAMP3-204ENST00000465312 EIF3DO15371 548 aaKnown RBP eCLIP20.24■□□□□ 0.83
SCAMP3-204ENST00000465312 MCF2P10911 925 aa20.24■□□□□ 0.83
SCAMP3-204ENST00000465312 YARSP54577 528 aaKnown RBP20.24■□□□□ 0.83
SCAMP3-204ENST00000465312 HTRA4P83105 476 aaPredicted RBP20.24■□□□□ 0.83
SCAMP3-204ENST00000465312 ZNF598Q86UK7 904 aaKnown RBP20.24■□□□□ 0.83
SCAMP3-204ENST00000465312 CMTR2Q8IYT2 770 aaKnown RBP20.24■□□□□ 0.83
SCAMP3-204ENST00000465312 POMGNT1Q8WZA1 660 aa20.24■□□□□ 0.83
SCAMP3-204ENST00000465312 MSTO1Q9BUK6 570 aa20.24■□□□□ 0.83
SCAMP3-204ENST00000465312 GBP3Q9H0R5 595 aa20.24■□□□□ 0.83
SCAMP3-204ENST00000465312 UBN1Q9NPG3 1134 aa20.24■□□□□ 0.83
SCAMP3-204ENST00000465312 KLK14Q9P0G3 267 aa20.24■□□□□ 0.83
SCAMP3-204ENST00000465312 TISP43B9A030 160 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 ANKRD63C9JTQ0 380 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 PPP1R37O75864 691 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 KIF20AO95235 890 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 MLH1P40692 756 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 SEZ6Q53EL9 994 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 CLLU1OSQ5K130 101 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 ZNF697Q5TEC3 545 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 SLFN12LQ6IEE8 588 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 AGMOQ6ZNB7 445 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 MRPL10Q7Z7H8 261 aaKnown RBP20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 LRRC43Q8N309 656 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 FAM193BQ96PV7 902 aaPredicted RBP20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 MRPL9Q9BYD2 267 aaKnown RBP20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 RNF39Q9H2S5 420 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 IKZF4Q9H2S9 585 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 CERS4Q9HA82 394 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 PCDHA5Q9Y5H7 936 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 UBE4BO95155 1302 aa20.23■□□□□ 0.83
SCAMP3-204ENST00000465312 RECQL4O94761 1208 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 RHOBTB3O94955 611 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 POMCP01189 267 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 PIGRP01833 764 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 EHHADHQ08426 723 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 STK4Q13043 487 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 KCNB1Q14721 858 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 NOMO2Q5JPE7 1267 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 ISM2Q6H9L7 571 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 ARMCX5Q6P1M9 558 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 CEP120Q8N960 986 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 ZNF689Q96CS4 500 aaPredicted RBP20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 FAM161BQ96MY7 647 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 GSDMAQ96QA5 445 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 GAD1Q99259 594 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 NUP62CLQ9H1M0 184 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 PTPRHQ9HD43 1115 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 MAPK8IP1Q9UQF2 711 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 GIT1Q9Y2X7 761 aa20.22■□□□□ 0.83
SCAMP3-204ENST00000465312 LINC01553A4QN01 128 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 PROZP22891 400 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 CTNNB1P35222 781 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 GRM5P41594 1212 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 MCL1Q07820 350 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 HS2ST1Q7LGA3 356 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 KIAA0895Q8NCT3 520 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 ZNF507Q8TCN5 953 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 SCFD1Q8WVM8 642 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 KCNN1Q92952 543 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 FAM212AQ96EL1 285 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 ACAP3Q96P50 834 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 CASD1Q96PB1 797 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 STRA6Q9BX79 667 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 TOPORSQ9NS56 1045 aaPredicted RBP20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 RNF19AQ9NV58 838 aa20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 AGO2Q9UKV8 859 aaKnown RBP20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 MRPL42Q9Y6G3 142 aaKnown RBP20.21■□□□□ 0.83
SCAMP3-204ENST00000465312 FNDC1Q4ZHG4 1894 aaPredicted RBP20.2■□□□□ 0.82
SCAMP3-204ENST00000465312 ARL5CA6NH57 179 aa20.2■□□□□ 0.82
SCAMP3-204ENST00000465312 BIN1O00499 593 aa20.2■□□□□ 0.82
SCAMP3-204ENST00000465312 OFD1O75665 1012 aa20.2■□□□□ 0.82
SCAMP3-204ENST00000465312 MBD3O95983 291 aa20.2■□□□□ 0.82
SCAMP3-204ENST00000465312 MCM4P33991 863 aa20.2■□□□□ 0.82
SCAMP3-204ENST00000465312 SCNN1GP51170 649 aa20.2■□□□□ 0.82
SCAMP3-204ENST00000465312 SLC39A4Q6P5W5 647 aa20.2■□□□□ 0.82
SCAMP3-204ENST00000465312 EPM2AIP1Q7L775 607 aaPredicted RBP20.2■□□□□ 0.82
SCAMP3-204ENST00000465312 CRIPAKQ8N1N5 446 aa20.2■□□□□ 0.82
SCAMP3-204ENST00000465312 ARNTL2Q8WYA1 636 aa20.2■□□□□ 0.82
SCAMP3-204ENST00000465312 ZFP42Q96MM3 310 aa20.2■□□□□ 0.82
SCAMP3-204ENST00000465312 TGS1Q96RS0 853 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms