RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 CXorf67Q86X51 503 aaPredicted RBP6.58□□□□□ -1.36
CACNA1C-223ENST00000465278 LMBR1Q8WVP7 490 aa6.58□□□□□ -1.36
CACNA1C-223ENST00000465278 DACT3Q96B18 629 aaPredicted RBP6.58□□□□□ -1.36
CACNA1C-223ENST00000465278 FMNL2Q96PY5 1086 aa6.58□□□□□ -1.36
CACNA1C-223ENST00000465278 ASPSCR1Q9BZE9 553 aa6.58□□□□□ -1.36
CACNA1C-223ENST00000465278 KCND1Q9NSA2 647 aa6.58□□□□□ -1.36
CACNA1C-223ENST00000465278 CDC42EP3Q9UKI2 254 aa6.58□□□□□ -1.36
CACNA1C-223ENST00000465278 EDARQ9UNE0 448 aa6.58□□□□□ -1.36
CACNA1C-223ENST00000465278 COL5A2P05997 1499 aaPredicted RBP6.58□□□□□ -1.36
CACNA1C-223ENST00000465278 E9PCH4 1651 aa6.58□□□□□ -1.36
CACNA1C-223ENST00000465278 TNKSO95271 1327 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 GABRDO14764 452 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 PCDH8O95206 1070 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 KNG1P01042 644 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 LPLP06858 475 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 APEX1P27695 318 aaKnown RBP6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 IARSP41252 1262 aaKnown RBP6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 GPR3P46089 330 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 EXOSC10Q01780 885 aaKnown RBP6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 DLX2Q07687 328 aaPredicted RBP6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 ABCB5Q2M3G0 1257 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 PRR31Q5SQ13 230 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 ZBTB41Q5SVQ8 909 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 MCTP2Q6DN12 878 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 SAPCD2Q86UD0 394 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 COL23A1Q86Y22 540 aaPredicted RBP6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 FERMT2Q96AC1 680 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 PRDM12Q9H4Q4 367 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 USP18Q9UMW8 372 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 CRB1P82279 1406 aa6.57□□□□□ -1.36
CACNA1C-223ENST00000465278 ABCC6O95255 1503 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 RFXAPO00287 272 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 FFAR3O14843 346 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 NUAK1O60285 661 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 H2AFYO75367 372 aaKnown RBP6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 TSPAN15O95858 294 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 MT-CO1P00395 513 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 MYBL2P10244 700 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 COL6A1P12109 1028 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 RPL13P26373 211 aaKnown RBP6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 AFF3P51826 1226 aaKnown RBP6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 ANTXR2P58335 489 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 KLF1Q13351 362 aaPredicted RBP6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 MOGSQ13724 837 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 STILQ15468 1287 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 PLEKHG6Q3KR16 790 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 VWA3BQ502W6 1294 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 KANK2Q63ZY3 851 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 KIAA1841Q6NSI8 718 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 CBARPQ8N350 705 aaPredicted RBP6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 ZCCHC14Q8WYQ9 949 aaKnown RBP6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 CEP89Q96ST8 783 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 SPATA25Q9BR10 227 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 L2HGDHQ9H9P8 463 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 USP36Q9P275 1121 aaKnown RBP6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 STXBP5LQ9Y2K9 1186 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 ANKRD30BQ9BXX2 1392 aa6.56□□□□□ -1.36
CACNA1C-223ENST00000465278 CACNA1GO43497 2377 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 WASHC2AQ641Q2 1341 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 MYPNQ86TC9 1320 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 UNC79Q9P2D8 2635 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 H0Y858 1186 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 CYP7B1O75881 506 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 C8AP07357 584 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 TSPY4P0CV99 314 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 TSPY10P0CW01 314 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 SARSP49591 514 aaKnown RBP6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 MANFP55145 182 aaKnown RBP6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 MAP3K12Q12852 859 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 CLUL1Q15846 466 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 UGT8Q16880 541 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 PITRM1Q5JRX3 1037 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 OTOP2Q7RTS6 562 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 KANSL1Q7Z3B3 1105 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 NUDT10Q8NFP7 164 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 NUDT11Q96G61 164 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 FAXDC2Q96IV6 333 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 CAPNS2Q96L46 248 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 MENTQ9BUN1 341 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 G3BP2Q9UN86 482 aaKnown RBP6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 ZDHHC9Q9Y397 364 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 PPP2R3BQ9Y5P8 575 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 TTC28Q96AY4 2481 aa6.55□□□□□ -1.36
CACNA1C-223ENST00000465278 ALDH1L1O75891 902 aa6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 CYP1A1P04798 512 aaPredicted RBP6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 KCNQ1P51787 676 aa6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 PCBP2Q15366 365 aaKnown RBP eCLIP6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 PTPN21Q16825 1174 aa6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 INAVAQ3KP66 663 aa6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 TOR2AQ5JU69 321 aa6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 BHLHE22Q8NFJ8 381 aaPredicted RBP6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 RPGRQ92834 1020 aaKnown RBP6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 FUBP3Q96I24 572 aaKnown RBP eCLIP6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 WRNIP1Q96S55 665 aa6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 QRSL1Q9H0R6 528 aaKnown RBP6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 MTG2Q9H4K7 406 aa6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 TYW1Q9NV66 732 aaKnown RBP6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 NTMQ9P121 344 aa6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 FTSJ1Q9UET6 329 aa6.54□□□□□ -1.36
CACNA1C-223ENST00000465278 TMPRSS11EQ9UL52 423 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms