RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 C1orf186Q6ZWK4 172 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 ZBTB33Q86T24 672 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 DAW1Q8N136 415 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 SYT2Q8N9I0 419 aaPredicted RBP13.43□□□□□ -0.26
XRN1-204ENST00000465074 BCL7CQ8WUZ0 217 aaPredicted RBP13.43□□□□□ -0.26
XRN1-204ENST00000465074 RSPH1Q8WYR4 309 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 RABGGTAQ92696 567 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 IGSF21Q96ID5 467 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 TCHPQ9BT92 498 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 CCDC113Q9H0I3 377 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 ZHX3Q9H4I2 956 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 NGRNQ9NPE2 291 aaKnown RBP13.43□□□□□ -0.26
XRN1-204ENST00000465074 SNTG2Q9NY99 539 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 CD207Q9UJ71 328 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 MTMR6Q9Y217 621 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 FAM50BQ9Y247 325 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 GIT1Q9Y2X7 761 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.42□□□□□ -0.26
XRN1-204ENST00000465074 C2CD2LO14523 706 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 FSCN2O14926 492 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 NR1I2O75469 434 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 HARSP12081 509 aaKnown RBP13.42□□□□□ -0.26
XRN1-204ENST00000465074 PLCG1P19174 1290 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 OSTNP61366 133 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 DUSP6Q16828 381 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 FAM187BQ17R55 369 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 PUS10Q3MIT2 529 aaKnown RBP13.42□□□□□ -0.26
XRN1-204ENST00000465074 TMEM119Q4V9L6 283 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 HYIQ5T013 277 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 NT5DC1Q5TFE4 455 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 ATF7IP2Q5U623 682 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 GPBP1Q86WP2 473 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 SNX21Q969T3 373 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 EPSTI1Q96J88 318 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 CLIC6Q96NY7 704 aa13.42□□□□□ -0.26
XRN1-204ENST00000465074 C2orf71A6NGG8 1288 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 GLP2RO95838 553 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 SRGAP2BP0DMP2 458 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 MATR3P43243 847 aaKnown RBP eCLIP13.41□□□□□ -0.26
XRN1-204ENST00000465074 SMTNP53814 917 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 SLC12A3P55017 1021 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 STRN3Q13033 797 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 MAPK7Q13164 816 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 MCM6Q14566 821 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 COL19A1Q14993 1142 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 USP49Q70CQ1 688 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 APBB1IPQ7Z5R6 666 aaPredicted RBP13.41□□□□□ -0.26
XRN1-204ENST00000465074 DDX53Q86TM3 631 aaKnown RBP13.41□□□□□ -0.26
XRN1-204ENST00000465074 MRPL43Q8N983 215 aaKnown RBP13.41□□□□□ -0.26
XRN1-204ENST00000465074 VN1R2Q8NFZ6 395 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 TMEM175Q9BSA9 504 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 PANK2Q9BZ23 570 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 ZSCAN16Q9H4T2 348 aaPredicted RBP13.41□□□□□ -0.26
XRN1-204ENST00000465074 CLEC1BQ9P126 229 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 TFIP11Q9UBB9 837 aaKnown RBP13.41□□□□□ -0.26
XRN1-204ENST00000465074 CACNG4Q9UBN1 327 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 RBM19Q9Y4C8 960 aaKnown RBP13.41□□□□□ -0.26
XRN1-204ENST00000465074 BDP1A6H8Y1 2624 aa13.41□□□□□ -0.26
XRN1-204ENST00000465074 CARNS1A5YM72 827 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 F8W810 466 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 MBTPS2O43462 519 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 RECQL4O94761 1208 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 FAM13AO94988 1023 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 PLS3P13797 630 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 GUCY2CP25092 1073 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 STK38Q15208 465 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 PTPAQ15257 358 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 ZNF568Q3ZCX4 644 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 ARSHQ5FYA8 562 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 FAM178BQ8IXR5 827 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 COLGALT2Q8IYK4 626 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 MYCT1Q8N699 235 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 BICD1Q96G01 975 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 USP28Q96RU2 1077 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 CDCA3Q99618 268 aaPredicted RBP13.4□□□□□ -0.26
XRN1-204ENST00000465074 TIPINQ9BVW5 301 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 TARS2Q9BW92 718 aaKnown RBP13.4□□□□□ -0.26
XRN1-204ENST00000465074 COLEC11Q9BWP8 271 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 MRPL4Q9BYD3 311 aaKnown RBP13.4□□□□□ -0.26
XRN1-204ENST00000465074 ZBP1Q9H171 429 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 CXCL16Q9H2A7 254 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 DAXXQ9UER7 740 aaPredicted RBP13.4□□□□□ -0.26
XRN1-204ENST00000465074 CCDC39Q9UFE4 941 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 FBXO2Q9UK22 296 aaPredicted RBP13.4□□□□□ -0.26
XRN1-204ENST00000465074 MYH15Q9Y2K3 1946 aa13.4□□□□□ -0.26
XRN1-204ENST00000465074 PHLPP2Q6ZVD8 1323 aa13.39□□□□□ -0.27
XRN1-204ENST00000465074 CASTOR2A6NHX0 329 aa13.39□□□□□ -0.27
XRN1-204ENST00000465074 CLASP2O75122 1294 aaKnown RBP13.39□□□□□ -0.27
XRN1-204ENST00000465074 TADA2AO75478 443 aa13.39□□□□□ -0.27
XRN1-204ENST00000465074 TXLNAP40222 546 aa13.39□□□□□ -0.27
XRN1-204ENST00000465074 GRIK3Q13003 919 aa13.39□□□□□ -0.27
XRN1-204ENST00000465074 SMAD4Q13485 552 aaKnown RBP13.39□□□□□ -0.27
XRN1-204ENST00000465074 DCAF4L1Q3SXM0 396 aa13.39□□□□□ -0.27
XRN1-204ENST00000465074 RRAGBQ5VZM2 374 aa13.39□□□□□ -0.27
XRN1-204ENST00000465074 KIAA1841Q6NSI8 718 aa13.39□□□□□ -0.27
XRN1-204ENST00000465074 TAS1R1Q7RTX1 841 aa13.39□□□□□ -0.27
XRN1-204ENST00000465074 KCTD17Q8N5Z5 321 aa13.39□□□□□ -0.27
XRN1-204ENST00000465074 LRRC15Q8TF66 581 aa13.39□□□□□ -0.27
XRN1-204ENST00000465074 HASPINQ8TF76 798 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms