RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 C2orf40Q9H1Z8 148 aa20.85■□□□□ 0.93
SF3A1-205ENST00000463818 BHMT2Q9H2M3 363 aa20.85■□□□□ 0.93
SF3A1-205ENST00000463818 TSHZ2Q9NRE2 1034 aa20.85■□□□□ 0.93
SF3A1-205ENST00000463818 NR2E1Q9Y466 385 aa20.85■□□□□ 0.93
SF3A1-205ENST00000463818 TMEM221A6NGB7 291 aa20.84■□□□□ 0.93
SF3A1-205ENST00000463818 M0R296 226 aa20.84■□□□□ 0.93
SF3A1-205ENST00000463818 C2CD2LO14523 706 aa20.84■□□□□ 0.93
SF3A1-205ENST00000463818 ST18O60284 1047 aa20.84■□□□□ 0.93
SF3A1-205ENST00000463818 DEPTORQ8TB45 409 aa20.84■□□□□ 0.93
SF3A1-205ENST00000463818 MFSD14AQ96MC6 490 aa20.84■□□□□ 0.93
SF3A1-205ENST00000463818 FBXL18Q96ME1 805 aa20.84■□□□□ 0.93
SF3A1-205ENST00000463818 HERC2P3Q9BVR0 1158 aa20.84■□□□□ 0.93
SF3A1-205ENST00000463818 USP20Q9Y2K6 914 aa20.84■□□□□ 0.93
SF3A1-205ENST00000463818 F8W810 466 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 EFEMP2O95967 443 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 PRKCBP05771 671 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 URODP06132 367 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 LIG1P18858 919 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 NAMPTP43490 491 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 CLCN4P51793 760 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 PRPF4BQ13523 1007 aaKnown RBP20.83■□□□□ 0.93
SF3A1-205ENST00000463818 PPP2R5AQ15172 486 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 MAPK6Q16659 721 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 TMEM132AQ24JP5 1023 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 TMC5Q6UXY8 1006 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 BMP8AQ7Z5Y6 402 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 IGSF22Q8N9C0 903 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 SNX29Q8TEQ0 813 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 RPS6KC1Q96S38 1066 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 RAB34Q9BZG1 259 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 PDZD7Q9H5P4 517 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 DDX19AQ9NUU7 478 aaKnown RBP20.83■□□□□ 0.93
SF3A1-205ENST00000463818 SSX2IPQ9Y2D8 614 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 KIF3AQ9Y496 699 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 STK24Q9Y6E0 443 aa20.83■□□□□ 0.93
SF3A1-205ENST00000463818 C2CD4DB7Z1M9 353 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 ACKR2O00590 384 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 N4BP3O15049 544 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 IL17AQ16552 155 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 PTPN21Q16825 1174 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 KIAA0319Q5VV43 1072 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 MCTP1Q6DN14 999 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 KIAA1841Q6NSI8 718 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 RNF168Q8IYW5 571 aaPredicted RBP20.82■□□□□ 0.92
SF3A1-205ENST00000463818 FEZF2Q8TBJ5 459 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 PBXIP1Q96AQ6 731 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 TMX3Q96JJ7 454 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 IFT74Q96LB3 600 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 CCDC113Q9H0I3 377 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 SNTG2Q9NY99 539 aa20.82■□□□□ 0.92
SF3A1-205ENST00000463818 ARID2Q68CP9 1835 aa20.81■□□□□ 0.92
SF3A1-205ENST00000463818 SPDYE4A6NLX3 237 aa20.81■□□□□ 0.92
SF3A1-205ENST00000463818 GLUD2P49448 558 aa20.81■□□□□ 0.92
SF3A1-205ENST00000463818 GRIK3Q13003 919 aa20.81■□□□□ 0.92
SF3A1-205ENST00000463818 KRT79Q5XKE5 535 aa20.81■□□□□ 0.92
SF3A1-205ENST00000463818 ZBTB33Q86T24 672 aa20.81■□□□□ 0.92
SF3A1-205ENST00000463818 RABGGTAQ92696 567 aa20.81■□□□□ 0.92
SF3A1-205ENST00000463818 KIFAP3Q92845 792 aa20.81■□□□□ 0.92
SF3A1-205ENST00000463818 RXFP1Q9HBX9 757 aa20.81■□□□□ 0.92
SF3A1-205ENST00000463818 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.81■□□□□ 0.92
SF3A1-205ENST00000463818 DNM3Q9UQ16 869 aa20.81■□□□□ 0.92
SF3A1-205ENST00000463818 PP2D1A8MPX8 630 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 E9PMD0 336 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 LAD1O00515 517 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 TEX28O15482 410 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 EDN1P05305 212 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 CDC25AP30304 524 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 DSG1Q02413 1049 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 SIGLEC14Q08ET2 396 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 EEF1DP3Q658K8 133 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 DTHD1Q6ZMT9 781 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 GPR149Q86SP6 731 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 ADPGKQ9BRR6 497 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 KIFC3Q9BVG8 833 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 GPR62Q9BZJ7 368 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 SFXN1Q9H9B4 322 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 CHST7Q9NS84 486 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 TECTAO75443 2155 aa20.8■□□□□ 0.92
SF3A1-205ENST00000463818 TADA2AO75478 443 aa20.79■□□□□ 0.92
SF3A1-205ENST00000463818 CD2BP2O95400 341 aaKnown RBP20.79■□□□□ 0.92
SF3A1-205ENST00000463818 ADH1AP07327 375 aa20.79■□□□□ 0.92
SF3A1-205ENST00000463818 PRPHP41219 470 aa20.79■□□□□ 0.92
SF3A1-205ENST00000463818 EFNA5P52803 228 aa20.79■□□□□ 0.92
SF3A1-205ENST00000463818 USP41Q3LFD5 358 aa20.79■□□□□ 0.92
SF3A1-205ENST00000463818 NT5DC1Q5TFE4 455 aa20.79■□□□□ 0.92
SF3A1-205ENST00000463818 FUT10Q6P4F1 479 aa20.79■□□□□ 0.92
SF3A1-205ENST00000463818 KREMEN2Q8NCW0 462 aa20.79■□□□□ 0.92
SF3A1-205ENST00000463818 B3GALT6Q96L58 329 aa20.79■□□□□ 0.92
SF3A1-205ENST00000463818 UPF2Q9HAU5 1272 aaKnown RBP20.79■□□□□ 0.92
SF3A1-205ENST00000463818 CACNG4Q9UBN1 327 aa20.79■□□□□ 0.92
SF3A1-205ENST00000463818 ADAM28Q9UKQ2 775 aa20.79■□□□□ 0.92
SF3A1-205ENST00000463818 ZMYM2Q9UBW7 1377 aa20.79■□□□□ 0.92
SF3A1-205ENST00000463818 GJB2P29033 226 aa20.78■□□□□ 0.92
SF3A1-205ENST00000463818 RILPL1Q5EBL4 403 aa20.78■□□□□ 0.92
SF3A1-205ENST00000463818 PAAF1Q9BRP4 392 aa20.78■□□□□ 0.92
SF3A1-205ENST00000463818 KCNH6Q9H252 994 aa20.78■□□□□ 0.92
SF3A1-205ENST00000463818 CXCL16Q9H2A7 254 aa20.78■□□□□ 0.92
SF3A1-205ENST00000463818 LIMD1Q9UGP4 676 aa20.78■□□□□ 0.92
SF3A1-205ENST00000463818 USTQ9Y2C2 406 aa20.78■□□□□ 0.92
SF3A1-205ENST00000463818 H3BQV1 296 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms