RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 NBL1P41271 181 aa25.78■■□□□ 1.72
SSNA1-203ENST00000463511 NR5A1Q13285 461 aa25.78■■□□□ 1.72
SSNA1-203ENST00000463511 PCBP1Q15365 356 aaKnown RBP eCLIP25.78■■□□□ 1.72
SSNA1-203ENST00000463511 RNF168Q8IYW5 571 aaPredicted RBP25.78■■□□□ 1.72
SSNA1-203ENST00000463511 CMASQ8NFW8 434 aaPredicted RBP25.78■■□□□ 1.72
SSNA1-203ENST00000463511 CCDC51Q96ER9 411 aa25.78■■□□□ 1.72
SSNA1-203ENST00000463511 CSRNP2Q9H175 543 aa25.78■■□□□ 1.72
SSNA1-203ENST00000463511 NXF3Q9H4D5 531 aaKnown RBP25.78■■□□□ 1.72
SSNA1-203ENST00000463511 MIOSQ9NXC5 875 aa25.78■■□□□ 1.72
SSNA1-203ENST00000463511 FBXL21Q9UKT6 434 aa25.78■■□□□ 1.72
SSNA1-203ENST00000463511 CCDC195A0A1B0GUA6 201 aa25.77■■□□□ 1.72
SSNA1-203ENST00000463511 PRR23AA6NEV1 266 aa25.77■■□□□ 1.72
SSNA1-203ENST00000463511 SLITRK3O94933 977 aa25.77■■□□□ 1.72
SSNA1-203ENST00000463511 EFEMP2O95967 443 aa25.77■■□□□ 1.72
SSNA1-203ENST00000463511 GLUD1P00367 558 aa25.77■■□□□ 1.72
SSNA1-203ENST00000463511 MBTD1Q05BQ5 628 aa25.77■■□□□ 1.72
SSNA1-203ENST00000463511 CAPSQ13938 189 aa25.77■■□□□ 1.72
SSNA1-203ENST00000463511 TFDP1Q14186 410 aa25.77■■□□□ 1.72
SSNA1-203ENST00000463511 KIAA0319Q5VV43 1072 aa25.77■■□□□ 1.72
SSNA1-203ENST00000463511 ASAP3Q8TDY4 903 aa25.77■■□□□ 1.72
SSNA1-203ENST00000463511 EIF2AK1Q9BQI3 630 aaKnown RBP25.77■■□□□ 1.72
SSNA1-203ENST00000463511 PI15O43692 258 aa25.76■■□□□ 1.71
SSNA1-203ENST00000463511 RFPL2O75678 378 aa25.76■■□□□ 1.71
SSNA1-203ENST00000463511 NPR3P17342 541 aa25.76■■□□□ 1.71
SSNA1-203ENST00000463511 NCBP1Q09161 790 aaKnown RBP25.76■■□□□ 1.71
SSNA1-203ENST00000463511 CUL4AQ13619 759 aa25.76■■□□□ 1.71
SSNA1-203ENST00000463511 ELMSAN1Q6PJG2 1045 aa25.76■■□□□ 1.71
SSNA1-203ENST00000463511 SIX5Q8N196 739 aa25.76■■□□□ 1.71
SSNA1-203ENST00000463511 WASF1Q92558 559 aa25.76■■□□□ 1.71
SSNA1-203ENST00000463511 B3GALT6Q96L58 329 aa25.76■■□□□ 1.71
SSNA1-203ENST00000463511 SNX27Q96L92 541 aa25.76■■□□□ 1.71
SSNA1-203ENST00000463511 TRIM6Q9C030 488 aaPredicted RBP25.76■■□□□ 1.71
SSNA1-203ENST00000463511 CLUHO75153 1309 aa25.75■■□□□ 1.71
SSNA1-203ENST00000463511 NARSO43776 548 aaKnown RBP25.75■■□□□ 1.71
SSNA1-203ENST00000463511 SPATA31D3P0C874 917 aa25.75■■□□□ 1.71
SSNA1-203ENST00000463511 ARF4P18085 180 aaPredicted RBP25.75■■□□□ 1.71
SSNA1-203ENST00000463511 AOC1P19801 751 aa25.75■■□□□ 1.71
SSNA1-203ENST00000463511 GBP2P32456 591 aaPredicted RBP25.75■■□□□ 1.71
SSNA1-203ENST00000463511 KRT2P35908 639 aa25.75■■□□□ 1.71
SSNA1-203ENST00000463511 DSG1Q02413 1049 aa25.75■■□□□ 1.71
SSNA1-203ENST00000463511 AMHR2Q16671 573 aa25.75■■□□□ 1.71
SSNA1-203ENST00000463511 SPATA31D4Q6ZUB0 917 aa25.75■■□□□ 1.71
SSNA1-203ENST00000463511 FRMD5Q7Z6J6 570 aa25.75■■□□□ 1.71
SSNA1-203ENST00000463511 IFNLR1Q8IU57 520 aaPredicted RBP25.75■■□□□ 1.71
SSNA1-203ENST00000463511 RXFP1Q9HBX9 757 aa25.75■■□□□ 1.71
SSNA1-203ENST00000463511 WDR6Q9NNW5 1121 aaKnown RBP25.75■■□□□ 1.71
SSNA1-203ENST00000463511 IGSF9Q9P2J2 1179 aa25.75■■□□□ 1.71
SSNA1-203ENST00000463511 DPP7Q9UHL4 492 aa25.75■■□□□ 1.71
SSNA1-203ENST00000463511 MYH15Q9Y2K3 1946 aa25.75■■□□□ 1.71
SSNA1-203ENST00000463511 K7ELQ4 463 aaPredicted RBP25.74■■□□□ 1.71
SSNA1-203ENST00000463511 B4GALT5O43286 388 aa25.74■■□□□ 1.71
SSNA1-203ENST00000463511 NR1I2O75469 434 aa25.74■■□□□ 1.71
SSNA1-203ENST00000463511 HMGN5P82970 282 aaKnown RBP25.74■■□□□ 1.71
SSNA1-203ENST00000463511 CDR2LQ86X02 465 aaPredicted RBP25.74■■□□□ 1.71
SSNA1-203ENST00000463511 RSAD2Q8WXG1 361 aa25.74■■□□□ 1.71
SSNA1-203ENST00000463511 SMG7Q92540 1137 aaKnown RBP25.74■■□□□ 1.71
SSNA1-203ENST00000463511 STAMQ92783 540 aa25.74■■□□□ 1.71
SSNA1-203ENST00000463511 TNFRSF25Q93038 417 aa25.74■■□□□ 1.71
SSNA1-203ENST00000463511 CCDC43Q96MW1 224 aaKnown RBP25.74■■□□□ 1.71
SSNA1-203ENST00000463511 PCDHA12Q9UN75 941 aa25.74■■□□□ 1.71
SSNA1-203ENST00000463511 DGAT1O75907 488 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 GLRA2P23416 452 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 AKAP5P24588 427 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 ARL2P36404 184 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 POU5F1BQ06416 359 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 CALCRLQ16602 461 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 PALB2Q86YC2 1186 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 GLYCTKQ8IVS8 523 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 HACE1Q8IYU2 909 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 HSD17B14Q9BPX1 270 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 COLEC11Q9BWP8 271 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 BRMS1Q9HCU9 246 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 CHST7Q9NS84 486 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 ANKEF1Q9NU02 776 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 GIT1Q9Y2X7 761 aa25.73■■□□□ 1.71
SSNA1-203ENST00000463511 LYPLA2O95372 231 aa25.72■■□□□ 1.71
SSNA1-203ENST00000463511 NPTXRO95502 500 aa25.72■■□□□ 1.71
SSNA1-203ENST00000463511 CFHP08603 1231 aa25.72■■□□□ 1.71
SSNA1-203ENST00000463511 FUT10Q6P4F1 479 aa25.72■■□□□ 1.71
SSNA1-203ENST00000463511 CYP26C1Q6V0L0 522 aa25.72■■□□□ 1.71
SSNA1-203ENST00000463511 CCDC105Q8IYK2 499 aa25.72■■□□□ 1.71
SSNA1-203ENST00000463511 GSTCDQ8NEC7 633 aa25.72■■□□□ 1.71
SSNA1-203ENST00000463511 RABGGTAQ92696 567 aa25.72■■□□□ 1.71
SSNA1-203ENST00000463511 ZNF707Q96C28 371 aaPredicted RBP25.72■■□□□ 1.71
SSNA1-203ENST00000463511 MYADMQ96S97 322 aa25.72■■□□□ 1.71
SSNA1-203ENST00000463511 RHOBTB2Q9BYZ6 727 aa25.72■■□□□ 1.71
SSNA1-203ENST00000463511 GPR62Q9BZJ7 368 aa25.72■■□□□ 1.71
SSNA1-203ENST00000463511 POLR3FQ9H1D9 316 aaPredicted RBP25.72■■□□□ 1.71
SSNA1-203ENST00000463511 TTC12Q9H892 705 aaPredicted RBP25.72■■□□□ 1.71
SSNA1-203ENST00000463511 KLK14Q9P0G3 267 aa25.72■■□□□ 1.71
SSNA1-203ENST00000463511 VWA8A3KMH1 1905 aa25.72■■□□□ 1.71
SSNA1-203ENST00000463511 TRIP11Q15643 1979 aa25.71■■□□□ 1.71
SSNA1-203ENST00000463511 A0A087WWV3 80 aa25.71■■□□□ 1.71
SSNA1-203ENST00000463511 RARRES1P49788 294 aa25.71■■□□□ 1.71
SSNA1-203ENST00000463511 SLC27A1Q6PCB7 646 aa25.71■■□□□ 1.71
SSNA1-203ENST00000463511 PIGOQ8TEQ8 1089 aa25.71■■□□□ 1.71
SSNA1-203ENST00000463511 NKD2Q969F2 451 aaPredicted RBP25.71■■□□□ 1.71
SSNA1-203ENST00000463511 RTP3Q9BQQ7 232 aa25.71■■□□□ 1.71
SSNA1-203ENST00000463511 NFKBIZQ9BYH8 718 aa25.71■■□□□ 1.71
SSNA1-203ENST00000463511 CACNG4Q9UBN1 327 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms