RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 NECAB3Q96P71 396 aaPredicted RBP17.87■□□□□ 0.45
COL1A1-202ENST00000463440 RPS6KC1Q96S38 1066 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 CCSER1Q9C0I3 900 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 ARHGAP28Q9P2N2 729 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 USP20Q9Y2K6 914 aa17.87■□□□□ 0.45
COL1A1-202ENST00000463440 SRPRBQ9Y5M8 271 aaKnown RBP17.87■□□□□ 0.45
COL1A1-202ENST00000463440 VCANP13611 3396 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 HIDE1A8MVS5 230 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 NRP1O14786 923 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 CXCL14O95715 111 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 SRGAP2BP0DMP2 458 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 PLS3P13797 630 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 PLCG1P19174 1290 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 SMTNP53814 917 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 DLX2Q07687 328 aaPredicted RBP17.86■□□□□ 0.45
COL1A1-202ENST00000463440 KARSQ15046 597 aaKnown RBP17.86■□□□□ 0.45
COL1A1-202ENST00000463440 NT5DC1Q5TFE4 455 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 GPBP1Q86WP2 473 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 COLGALT2Q8IYK4 626 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 MRPL43Q8N983 215 aaKnown RBP17.86■□□□□ 0.45
COL1A1-202ENST00000463440 SPIRE2Q8WWL2 714 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 NTPCRQ9BSD7 190 aaKnown RBP17.86■□□□□ 0.45
COL1A1-202ENST00000463440 ZBP1Q9H171 429 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 MIOSQ9NXC5 875 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 KLK14Q9P0G3 267 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 CD207Q9UJ71 328 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 FBXO2Q9UK22 296 aaPredicted RBP17.86■□□□□ 0.45
COL1A1-202ENST00000463440 TNFSF13BQ9Y275 285 aa17.86■□□□□ 0.45
COL1A1-202ENST00000463440 C2orf71A6NGG8 1288 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 SLC16A4O15374 487 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 EDN1P05305 212 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 IL9P15248 144 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 TXLNAP40222 546 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 OR1G1P47890 313 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 DSC1Q08554 894 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 GRIK3Q13003 919 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 GIT2Q14161 759 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 DHX8Q14562 1220 aaKnown RBP17.85■□□□□ 0.45
COL1A1-202ENST00000463440 CLUL1Q15846 466 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 EEF1DP3Q658K8 133 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 TMEM87AQ8NBN3 555 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 BCL7CQ8WUZ0 217 aaPredicted RBP17.85■□□□□ 0.45
COL1A1-202ENST00000463440 RAD54LQ92698 747 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 USP28Q96RU2 1077 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 MRPL4Q9BYD3 311 aaKnown RBP17.85■□□□□ 0.45
COL1A1-202ENST00000463440 BLOC1S4Q9NUP1 217 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 SNTG2Q9NY99 539 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 LARSQ9P2J5 1176 aaKnown RBP17.85■□□□□ 0.45
COL1A1-202ENST00000463440 CCDC39Q9UFE4 941 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 ODF2LQ9ULJ1 636 aa17.85■□□□□ 0.45
COL1A1-202ENST00000463440 MORC2Q9Y6X9 1032 aaPredicted RBP17.85■□□□□ 0.45
COL1A1-202ENST00000463440 TDRD15B5MCY1 1934 aaKnown RBP17.84■□□□□ 0.45
COL1A1-202ENST00000463440 NPHP3-ACAD11A0A0J9YXS1 232 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 H0YCG3 227 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 GLP2RO95838 553 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 CTSAP10619 480 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 STRN3Q13033 797 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 SMAD4Q13485 552 aaKnown RBP17.84■□□□□ 0.45
COL1A1-202ENST00000463440 MCM6Q14566 821 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 SLC39A14Q15043 492 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 ARSHQ5FYA8 562 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 SPECC1Q5M775 1068 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 GSTCDQ8NEC7 633 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 LARP4BQ92615 738 aaKnown RBP17.84■□□□□ 0.45
COL1A1-202ENST00000463440 EPSTI1Q96J88 318 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 MSLNLQ96KJ4 702 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 ZNF396Q96N95 335 aaPredicted RBP17.84■□□□□ 0.45
COL1A1-202ENST00000463440 ACO2Q99798 780 aaKnown RBP17.84■□□□□ 0.45
COL1A1-202ENST00000463440 CLEC1BQ9P126 229 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 BARX2Q9UMQ3 279 aaPredicted RBP17.84■□□□□ 0.45
COL1A1-202ENST00000463440 PRG3Q9Y2Y8 225 aaPredicted RBP17.84■□□□□ 0.45
COL1A1-202ENST00000463440 NCOR1O75376 2440 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 MYH11P35749 1972 aa17.84■□□□□ 0.45
COL1A1-202ENST00000463440 SPTBN5Q9NRC6 3674 aaKnown RBP17.83■□□□□ 0.45
COL1A1-202ENST00000463440 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.83■□□□□ 0.44
COL1A1-202ENST00000463440 MBTPS2O43462 519 aa17.83■□□□□ 0.44
COL1A1-202ENST00000463440 RECQL4O94761 1208 aa17.83■□□□□ 0.44
COL1A1-202ENST00000463440 KRT18P05783 430 aaKnown RBP17.83■□□□□ 0.44
COL1A1-202ENST00000463440 DDIT3P35638 169 aa17.83■□□□□ 0.44
COL1A1-202ENST00000463440 CACNB1Q02641 598 aaPredicted RBP17.83■□□□□ 0.44
COL1A1-202ENST00000463440 COASYQ13057 564 aa17.83■□□□□ 0.44
COL1A1-202ENST00000463440 TAS1R3Q7RTX0 852 aa17.83■□□□□ 0.44
COL1A1-202ENST00000463440 FAM178BQ8IXR5 827 aa17.83■□□□□ 0.44
COL1A1-202ENST00000463440 KRI1Q8N9T8 703 aaKnown RBP17.83■□□□□ 0.44
COL1A1-202ENST00000463440 TMEM161BQ8NDZ6 487 aa17.83■□□□□ 0.44
COL1A1-202ENST00000463440 CLIC6Q96NY7 704 aa17.83■□□□□ 0.44
COL1A1-202ENST00000463440 REEP2Q9BRK0 252 aa17.83■□□□□ 0.44
COL1A1-202ENST00000463440 TARS2Q9BW92 718 aaKnown RBP17.83■□□□□ 0.44
COL1A1-202ENST00000463440 COLEC11Q9BWP8 271 aa17.83■□□□□ 0.44
COL1A1-202ENST00000463440 STK17AQ9UEE5 414 aa17.83■□□□□ 0.44
COL1A1-202ENST00000463440 GDAQ9Y2T3 454 aa17.83■□□□□ 0.44
COL1A1-202ENST00000463440 IRAK3Q9Y616 596 aa17.83■□□□□ 0.44
COL1A1-202ENST00000463440 FAM13AO94988 1023 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 THP07101 528 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 NASPP49321 788 aaPredicted RBP17.82■□□□□ 0.44
COL1A1-202ENST00000463440 STK38Q15208 465 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 ZNF568Q3ZCX4 644 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 LLGL2Q6P1M3 1020 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 TMEM184AQ6ZMB5 413 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 USP49Q70CQ1 688 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms