RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 H0YCG3 227 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 EXTL3O43909 919 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 ADCY3O60266 1144 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 ECM2O94769 699 aaPredicted RBP13.86□□□□□ -0.19
VAPB-203ENST00000463370 ZRANB2O95218 330 aaKnown RBP eCLIP13.86□□□□□ -0.19
VAPB-203ENST00000463370 RFX1P22670 979 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 ANXA13P27216 316 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 USP8P40818 1118 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 GTF2A2P52657 109 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 C2orf54Q08AI8 447 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 KCNV1Q6PIU1 500 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 MAMDC4Q6UXC1 1216 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 VPS36Q86VN1 386 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 BBXQ8WY36 941 aaPredicted RBP13.86□□□□□ -0.19
VAPB-203ENST00000463370 DHX38Q92620 1227 aaKnown RBP13.86□□□□□ -0.19
VAPB-203ENST00000463370 TATDN2Q93075 761 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 PDE11AQ9HCR9 933 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 RAB20Q9NX57 234 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 HYOU1Q9Y4L1 999 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 BTNL10A8MVZ5 291 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 CELF2O95319 508 aaKnown RBP13.86□□□□□ -0.19
VAPB-203ENST00000463370 SGPL1O95470 568 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 PIGRP01833 764 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 H2AFZP0C0S5 128 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 SRGAP2CP0DJJ0 459 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 GPC3P51654 580 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 PRPF4BQ13523 1007 aaKnown RBP13.86□□□□□ -0.19
VAPB-203ENST00000463370 CC2D1AQ6P1N0 951 aaPredicted RBP13.86□□□□□ -0.19
VAPB-203ENST00000463370 H2AFVQ71UI9 128 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 PLPPR4Q7Z2D5 763 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 LRRC57Q8N9N7 239 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 FBXL13Q8NEE6 735 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 KCNN1Q92952 543 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 RNPEPQ9H4A4 650 aa13.86□□□□□ -0.19
VAPB-203ENST00000463370 SEPT11Q9NVA2 429 aaKnown RBP13.86□□□□□ -0.19
VAPB-203ENST00000463370 CYP26A1O43174 497 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 CALCAP01258 141 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 HARSP12081 509 aaKnown RBP13.85□□□□□ -0.19
VAPB-203ENST00000463370 PRLRP16471 622 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 ABCB4P21439 1286 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 NOP2P46087 812 aaKnown RBP13.85□□□□□ -0.19
VAPB-203ENST00000463370 VSNL1P62760 191 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 ARHGAP1Q07960 439 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 LAMTOR4Q0VGL1 99 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 TTLL4Q14679 1199 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 MEI1Q5TIA1 1274 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 SLC47A2Q86VL8 602 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 ARHGEF26Q96DR7 871 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 AGPAT1Q99943 283 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 OSGEPQ9NPF4 335 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 ADGRA2Q96PE1 1338 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 MYH9P35579 1960 aaKnown RBP13.85□□□□□ -0.19
VAPB-203ENST00000463370 A0A0B4J269 797 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 IGKV6-21A0A0C4DH24 114 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.85□□□□□ -0.19
VAPB-203ENST00000463370 ASB14A6NK59 587 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 MRPS25P82663 173 aaKnown RBP13.85□□□□□ -0.19
VAPB-203ENST00000463370 CBX1P83916 185 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 TAF3Q5VWG9 929 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 TMCO3Q6UWJ1 677 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 C15orf39Q6ZRI6 1047 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 NOP9Q86U38 636 aaKnown RBP13.85□□□□□ -0.19
VAPB-203ENST00000463370 FAM71AQ8IYT1 594 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 RNF149Q8NC42 400 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 TPCN2Q8NHX9 752 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 SCFD2Q8WU76 684 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 FAM167AQ96KS9 214 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 PCDHB18PQ96TA0 734 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 MSTO1Q9BUK6 570 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 ARGLU1Q9NWB6 273 aaPredicted RBP13.85□□□□□ -0.19
VAPB-203ENST00000463370 TRPC6Q9Y210 931 aa13.85□□□□□ -0.19
VAPB-203ENST00000463370 MCM3APO60318 1980 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 MSCO60682 206 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 SASH3O75995 380 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 CHRNB2P17787 502 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 TCP1P17987 556 aaKnown RBP13.84□□□□□ -0.19
VAPB-203ENST00000463370 ADCYAP1R1P41586 468 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 MATR3P43243 847 aaKnown RBP eCLIP13.84□□□□□ -0.19
VAPB-203ENST00000463370 CLDN10P78369 228 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 CCNA1P78396 465 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 CKAP4Q07065 602 aaKnown RBP13.84□□□□□ -0.19
VAPB-203ENST00000463370 PSMD6Q15008 389 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 TDRD10Q5VZ19 366 aaKnown RBP13.84□□□□□ -0.19
VAPB-203ENST00000463370 SPRYD7Q5W111 196 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 ANKRD23Q86SG2 305 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 RPUSD2Q8IZ73 545 aaKnown RBP13.84□□□□□ -0.19
VAPB-203ENST00000463370 EPS8L1Q8TE68 723 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 SHC3Q92529 594 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 HINFPQ9BQA5 517 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 KATNBL1Q9H079 304 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 CCDC113Q9H0I3 377 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 TMEM134Q9H6X4 195 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 NOCTQ9UK39 431 aaKnown RBP13.84□□□□□ -0.19
VAPB-203ENST00000463370 RAB21Q9UL25 225 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 DIS3Q9Y2L1 958 aaKnown RBP13.84□□□□□ -0.19
VAPB-203ENST00000463370 DAAM1Q9Y4D1 1078 aa13.84□□□□□ -0.19
VAPB-203ENST00000463370 ZMYND10O75800 440 aa13.83□□□□□ -0.19
VAPB-203ENST00000463370 SNAI1O95863 264 aaPredicted RBP13.83□□□□□ -0.19
VAPB-203ENST00000463370 TNNI1P19237 187 aa13.83□□□□□ -0.19
VAPB-203ENST00000463370 TNFAIP3P21580 790 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms