RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 TNMDQ9H2S6 317 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 NRDE2Q9H7Z3 1164 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 POLD4Q9HCU8 107 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 PTPRHQ9HD43 1115 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 TLR9Q9NR96 1032 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 FAM13BQ9NYF5 915 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 NPHP3-ACAD11A0A0J9YXS1 232 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 PIGRP01833 764 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 ME1P48163 572 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 RAD51AP2Q09MP3 1159 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 GRIK3Q13003 919 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 BMS1Q14692 1282 aaKnown RBP14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 KYAT1Q16773 422 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 HAUS6Q7Z4H7 955 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 MYCT1Q8N699 235 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 IQUBQ8NA54 791 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 CDCA3Q99618 268 aaPredicted RBP14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 ALG13Q9NP73 1137 aaKnown RBP14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 NGRNQ9NPE2 291 aaKnown RBP14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 TDRD15B5MCY1 1934 aaKnown RBP14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 SFI1A8K8P3 1242 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 TRAK2O60296 914 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 NR1I2O75469 434 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 TOM1L1O75674 476 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 EDN1P05305 212 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 LIG1P18858 919 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 GRM5P41594 1212 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 AMPD3Q01432 767 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 DSC1Q08554 894 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 CAMK1Q14012 370 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 DHX8Q14562 1220 aaKnown RBP14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 E2F4Q16254 413 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 EEF1DP3Q658K8 133 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 CNNM4Q6P4Q7 775 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 SHC4Q6S5L8 630 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 MPZL3Q6UWV2 235 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 PPM1EQ8WY54 764 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 HLA-CQ95604 372 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 TMEM169Q96HH4 297 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 RPS6KC1Q96S38 1066 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 GAD1Q99259 594 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 SCAND2PQ9GZW5 306 aaPredicted RBP14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 HCSTQ9UBK5 93 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 PCDHA7Q9UN72 937 aa14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.34□□□□□ -0.11
R3HDM1-213ENST00000463230 TTLL13PA6NNM8 815 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 ZC3H11AO75152 810 aaKnown RBP eCLIP14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 GALTP07902 379 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 MLH1P40692 756 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 ALCAMQ13740 583 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 ZNF568Q3ZCX4 644 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 TCEAL5Q5H9L2 206 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 RESP18Q5W5W9 173 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 DDX53Q86TM3 631 aaKnown RBP14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 FAM178BQ8IXR5 827 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 DDX12PQ92771 950 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 PARP2Q9UGN5 583 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 HES2Q9Y543 173 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 A0A087X0B3 334 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 MYMKA6NI61 221 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 K7ENM7 598 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 ALDH2P05091 517 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 DNAJB1P25685 340 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 GTF2BQ00403 316 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 SKIV2LQ15477 1246 aaKnown RBP14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 LONRF3Q496Y0 759 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 COLGALT2Q8IYK4 626 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 DNAJC19Q96DA6 116 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 IGSF21Q96ID5 467 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 CCDC94Q9BW85 323 aaPredicted RBP14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 TARS2Q9BW92 718 aaKnown RBP14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 APOL6Q9BWW8 343 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 CDT1Q9H211 546 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 TOPORSQ9NS56 1045 aaPredicted RBP14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 KBTBD4Q9NVX7 518 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 USP25Q9UHP3 1055 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 TBX20Q9UMR3 447 aa14.33□□□□□ -0.12
R3HDM1-213ENST00000463230 FRMD3A2A2Y4 597 aa14.32□□□□□ -0.12
R3HDM1-213ENST00000463230 ABLIM1O14639 778 aa14.32□□□□□ -0.12
R3HDM1-213ENST00000463230 RECQL4O94761 1208 aa14.32□□□□□ -0.12
R3HDM1-213ENST00000463230 SLC11A1P49279 550 aa14.32□□□□□ -0.12
R3HDM1-213ENST00000463230 MRPS5P82675 430 aaKnown RBP14.32□□□□□ -0.12
R3HDM1-213ENST00000463230 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
R3HDM1-213ENST00000463230 CDR2LQ86X02 465 aaPredicted RBP14.32□□□□□ -0.12
R3HDM1-213ENST00000463230 HS6ST3Q8IZP7 471 aa14.32□□□□□ -0.12
R3HDM1-213ENST00000463230 LEO1Q8WVC0 666 aaPredicted RBP14.32□□□□□ -0.12
R3HDM1-213ENST00000463230 PABPC5Q96DU9 382 aaKnown RBP14.32□□□□□ -0.12
R3HDM1-213ENST00000463230 SPATA32Q96LK8 384 aa14.32□□□□□ -0.12
R3HDM1-213ENST00000463230 OLFML3Q9NRN5 406 aa14.32□□□□□ -0.12
R3HDM1-213ENST00000463230 FAN1Q9Y2M0 1017 aa14.32□□□□□ -0.12
R3HDM1-213ENST00000463230 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.31□□□□□ -0.12
R3HDM1-213ENST00000463230 DDHD2O94830 711 aa14.31□□□□□ -0.12
R3HDM1-213ENST00000463230 POMCP01189 267 aa14.31□□□□□ -0.12
R3HDM1-213ENST00000463230 AKAP5P24588 427 aa14.31□□□□□ -0.12
R3HDM1-213ENST00000463230 SCNN1GP51170 649 aa14.31□□□□□ -0.12
R3HDM1-213ENST00000463230 YARSP54577 528 aaKnown RBP14.31□□□□□ -0.12
R3HDM1-213ENST00000463230 MCL1Q07820 350 aa14.31□□□□□ -0.12
R3HDM1-213ENST00000463230 SMC1AQ14683 1233 aaKnown RBP14.31□□□□□ -0.12
R3HDM1-213ENST00000463230 NOLC1Q14978 699 aaKnown RBP eCLIP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms