RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 TACC1O75410 805 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 ZRANB2O95218 330 aaKnown RBP eCLIP15.69■□□□□ 0.1
HDAC6-213ENST00000462730 MOCS3O95396 460 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 RFX1P22670 979 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 RGS2P41220 211 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 MCCD1P59942 119 aaPredicted RBP15.69■□□□□ 0.1
HDAC6-213ENST00000462730 AMPD2Q01433 879 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 PRAMEF19Q5SWL8 479 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 PHLDB3Q6NSJ2 640 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 OR6J1Q8NGC5 347 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 TMC2Q8TDI7 906 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 PARD3BQ8TEW8 1205 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 TRAPPC12Q8WVT3 735 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 KCNN1Q92952 543 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 FAM213AQ9BRX8 229 aa15.69■□□□□ 0.1
HDAC6-213ENST00000462730 K7ERI5 159 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 ENC1O14682 589 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 HBP1O60381 514 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 PIGRP01833 764 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 ATP1A1P05023 1023 aaKnown RBP15.68■□□□□ 0.1
HDAC6-213ENST00000462730 ANXA13P27216 316 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 CYP2C19P33261 490 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 MAP2K1Q02750 393 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-213ENST00000462730 ARHGAP44Q17R89 818 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 IQSEC1Q6DN90 963 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 TMCO3Q6UWJ1 677 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 ARHGEF19Q8IW93 802 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 GPR88Q9GZN0 384 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 RNPEPQ9H4A4 650 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 TOPORSQ9NS56 1045 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-213ENST00000462730 GJD2Q9UKL4 321 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 CAPN6Q9Y6Q1 641 aa15.68■□□□□ 0.1
HDAC6-213ENST00000462730 IGKV6-21A0A0C4DH24 114 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 PMM2O15305 246 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 ADCY3O60266 1144 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 EVI5O60447 810 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 MMP3P08254 477 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 TNFAIP2Q03169 654 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 IER5Q5VY09 327 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 VPS36Q86VN1 386 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 LRRC71Q8N4P6 559 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 TRIM58Q8NG06 486 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 PRPF31Q8WWY3 499 aaKnown RBP15.67■□□□□ 0.1
HDAC6-213ENST00000462730 POP1Q99575 1024 aaKnown RBP15.67■□□□□ 0.1
HDAC6-213ENST00000462730 TMEM134Q9H6X4 195 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 SUGCTQ9HAC7 445 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 TMEM8AQ9HCN3 771 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 UBE2TQ9NPD8 197 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-213ENST00000462730 HDAC6Q9UBN7 1215 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 GAS2O43903 313 aaKnown RBP15.67■□□□□ 0.1
HDAC6-213ENST00000462730 EXTL3O43909 919 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 AOC2O75106 756 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 LRRN2O75325 713 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 NOGQ13253 232 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 MKRN4PQ13434 485 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-213ENST00000462730 IRF5Q13568 498 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 WHAMMP3Q1A5X7 153 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 OLFML2BQ68BL8 750 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 KRT39Q6A163 491 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 TRAPPC11Q7Z392 1133 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 USP37Q86T82 979 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 FMNL3Q8IVF7 1028 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 CEP112Q8N8E3 955 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 TCP11Q8WWU5 503 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 ALS2CR12Q96Q35 445 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 C16orf70Q9BSU1 422 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 TARS2Q9BW92 718 aaKnown RBP15.67■□□□□ 0.1
HDAC6-213ENST00000462730 PACSIN1Q9BY11 444 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 PUF60Q9UHX1 559 aaKnown RBP15.67■□□□□ 0.1
HDAC6-213ENST00000462730 AGO2Q9UKV8 859 aaKnown RBP15.67■□□□□ 0.1
HDAC6-213ENST00000462730 STYXL1Q9Y6J8 313 aa15.67■□□□□ 0.1
HDAC6-213ENST00000462730 ANO9A1A5B4 782 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 ZNF233A6NK53 670 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 PPFIA4O75335 1185 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 ALDH1A1P00352 501 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 TFRCP02786 760 aaKnown RBP15.66■□□□□ 0.1
HDAC6-213ENST00000462730 EDN1P05305 212 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 ZNF865P0CJ78 1059 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-213ENST00000462730 DLATP10515 647 aaKnown RBP15.66■□□□□ 0.1
HDAC6-213ENST00000462730 HOXD8P13378 290 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-213ENST00000462730 MATR3P43243 847 aaKnown RBP eCLIP15.66■□□□□ 0.1
HDAC6-213ENST00000462730 PLA2G4AP47712 749 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 TEX35Q5T0J7 233 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 PAPD7Q5XG87 772 aaKnown RBP15.66■□□□□ 0.1
HDAC6-213ENST00000462730 SRGAP1Q7Z6B7 1085 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 EXOC8Q8IYI6 725 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 PSPC1Q8WXF1 523 aaKnown RBP15.66■□□□□ 0.1
HDAC6-213ENST00000462730 LENG1Q96BZ8 264 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-213ENST00000462730 ZBTB10Q96DT7 871 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 ZBTB45Q96K62 511 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-213ENST00000462730 ARHGAP39Q9C0H5 1083 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 KIAA1586Q9HCI6 787 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.66■□□□□ 0.11e-15■■■■■ 67.3
HDAC6-213ENST00000462730 SALL4Q9UJQ4 1053 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 KIAA0391O15091 583 aaKnown RBP15.66■□□□□ 0.1
HDAC6-213ENST00000462730 BUB1O43683 1085 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 GTF2H1P32780 548 aa15.66■□□□□ 0.1
HDAC6-213ENST00000462730 NAP1L1P55209 391 aaKnown RBP15.66■□□□□ 0.1
HDAC6-213ENST00000462730 NLRP11P59045 1033 aaKnown RBP15.66■□□□□ 0.1
HDAC6-213ENST00000462730 IGBP1P78318 339 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms