RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 FAM153AQ9UHL3 310 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 ESYT2A0FGR8 921 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 RCCD1A6NED2 376 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 EVI5O60447 810 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 GNAZP19086 355 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 GNA11P29992 359 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 ALDH5A1P51649 535 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 ADCY7P51828 1080 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 NCALDP61601 193 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 GUCY2DQ02846 1103 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 PABPC1LQ4VXU2 614 aaKnown RBP12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 OLFML2BQ68BL8 750 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 FERMT2Q96AC1 680 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 IFT43Q96FT9 208 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 MAML3Q96JK9 1138 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 C6orf50Q9HD87 102 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 ZNFX1Q9P2E3 1918 aaKnown RBP12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 SMCO2A6NFE2 343 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 PIK3CDO00329 1044 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 TPP2P29144 1249 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 GRK4P32298 578 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 MSH2P43246 934 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 STX17P56962 302 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 CNTN2Q02246 1040 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 DEUP1Q05D60 604 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 BNIP1Q12981 228 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 TSNAXIP1Q2TAA8 658 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 SLC9C1Q4G0N8 1177 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 MFSD14CQ5VZR4 134 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 HOOK3Q86VS8 718 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 DNERQ8NFT8 737 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 NPLOC4Q8TAT6 608 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 SYTL5Q8TDW5 730 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 KIFAP3Q92845 792 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 IQCGQ9H095 443 aaKnown RBP12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 RIC8AQ9NPQ8 531 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 TAB2Q9NYJ8 693 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 CTNND2Q9UQB3 1225 aa12.36□□□□□ -0.43
TRAPPC3-205ENST00000462715 ATP5HO75947 161 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 HMGCRP04035 888 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 RARAP10276 462 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 CDC25AP30304 524 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 PARP6Q2NL67 630 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 ZNF658Q5TYW1 1059 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 KLHL10Q6JEL2 608 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 TYW1BQ6NUM6 668 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 PBKQ96KB5 322 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 ZMYND12Q9H0C1 365 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 VPS54Q9P1Q0 977 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 BIN2Q9UBW5 565 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 PLXNA1Q9UIW2 1896 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 HTTP42858 3142 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 ASB14A6NK59 587 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 ELNP15502 786 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 HOXA13P31271 388 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 CTNNA1P35221 906 aaKnown RBP12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 COPS2P61201 443 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 ASRGL1Q7L266 308 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 NSUN6Q8TEA1 469 aaKnown RBP12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 NCSTNQ92542 709 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 CCDC42Q96M95 316 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 MCOLN1Q9GZU1 580 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 ADAM22Q9P0K1 906 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 PCDHA13Q9Y5I0 950 aa12.35□□□□□ -0.43
TRAPPC3-205ENST00000462715 KIF4AO95239 1232 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 LMNAP02545 664 aaKnown RBP12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 ADAM9Q13443 819 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 CCL14Q16627 93 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 SH2D4BQ5SQS7 431 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 GALNT17Q6IS24 598 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 ERICH1Q86X53 443 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 IFT81Q8WYA0 676 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 TRIB2Q92519 343 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 NOX5Q96PH1 765 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 RMDN3Q96TC7 470 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 TINF2Q9BSI4 451 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 TRIM7Q9C029 511 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 MMADHCQ9H3L0 296 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 EHMT1Q9H9B1 1298 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 DNAAF2Q9NVR5 837 aaKnown RBP12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 CNOT8Q9UFF9 292 aaKnown RBP12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 TMEM59LQ9UK28 342 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 SYNGAP1Q96PV0 1343 aa12.34□□□□□ -0.43
TRAPPC3-205ENST00000462715 SOWAHBA6NEL2 793 aa12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 MEIS2O14770 477 aa12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 GTPBP6O43824 516 aaPredicted RBP12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 ATP2C2O75185 946 aa12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 OAS1P00973 400 aaKnown RBP12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 MMP1P03956 469 aa12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 CALB2P22676 271 aa12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 TMOD1P28289 359 aa12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 TOB1P50616 345 aaPredicted RBP12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 UBXN2AP68543 259 aa12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 CCDC15Q0P6D6 951 aa12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 ARHGEF16Q5VV41 709 aa12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 USP17L6PQ6QN14 398 aa12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 MAMDC4Q6UXC1 1216 aa12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 ENDOVQ8N8Q3 282 aaKnown RBP12.33□□□□□ -0.43
TRAPPC3-205ENST00000462715 TLR10Q9BXR5 811 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms