RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 EYA3Q99504 573 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 FEZ1Q99689 392 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 COQ6Q9Y2Z9 468 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 TNPO3Q9Y5L0 923 aaKnown RBP8.63□□□□□ -1.03
UBE4B-204ENST00000462658 SNX14Q9Y5W7 946 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 SLX4Q8IY92 1834 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 HGSO14964 777 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-204ENST00000462658 SLC27A2O14975 620 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 GPAA1O43292 621 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 RFPL3O75679 317 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 CKMP06732 381 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 HSPD1P10809 573 aaKnown RBP8.62□□□□□ -1.03
UBE4B-204ENST00000462658 NAT1P18440 290 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 CDR1P51861 262 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 EPHB3P54753 998 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 TGFB2P61812 414 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 VPS53Q5VIR6 699 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 OLFML2BQ68BL8 750 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 SPTY2D1Q68D10 685 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-204ENST00000462658 HSCBQ8IWL3 235 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 ZGPATQ8N5A5 531 aaKnown RBP8.62□□□□□ -1.03
UBE4B-204ENST00000462658 KCNN1Q92952 543 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 COA1Q9GZY4 146 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 GCM1Q9NP62 436 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 SLC6A20Q9NP91 592 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 CATSPERZQ9NTU4 200 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 CBLCQ9ULV8 474 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 JAG2Q9Y219 1238 aa8.62□□□□□ -1.03
UBE4B-204ENST00000462658 COL1A1P02452 1464 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-204ENST00000462658 SALL1Q9NSC2 1324 aa8.61□□□□□ -1.03
UBE4B-204ENST00000462658 TEX51A0A1B0GUA7 166 aa8.61□□□□□ -1.03
UBE4B-204ENST00000462658 CCDC66A2RUB6 948 aa8.61□□□□□ -1.03
UBE4B-204ENST00000462658 OPA1O60313 960 aa8.61□□□□□ -1.03
UBE4B-204ENST00000462658 TADA3O75528 432 aa8.61□□□□□ -1.03
UBE4B-204ENST00000462658 FARP2O94887 1054 aaPredicted RBP8.61□□□□□ -1.03
UBE4B-204ENST00000462658 HSD3B2P26439 372 aa8.61□□□□□ -1.03
UBE4B-204ENST00000462658 NEK4P51957 841 aa8.61□□□□□ -1.03
UBE4B-204ENST00000462658 SPIRE1Q08AE8 756 aa8.61□□□□□ -1.03
UBE4B-204ENST00000462658 DALRD3Q5D0E6 543 aaKnown RBP8.61□□□□□ -1.03
UBE4B-204ENST00000462658 EMC4Q5J8M3 183 aa8.61□□□□□ -1.03
UBE4B-204ENST00000462658 NAA16Q6N069 864 aaPredicted RBP8.61□□□□□ -1.03
UBE4B-204ENST00000462658 LDHDQ86WU2 507 aa8.61□□□□□ -1.03
UBE4B-204ENST00000462658 CISD2Q8N5K1 135 aaKnown RBP8.61□□□□□ -1.03
UBE4B-204ENST00000462658 NINJ1Q92982 152 aa8.61□□□□□ -1.03
UBE4B-204ENST00000462658 NSUN4Q96CB9 384 aaKnown RBP8.61□□□□□ -1.03
UBE4B-204ENST00000462658 FAM84AQ96KN4 292 aa8.61□□□□□ -1.03
UBE4B-204ENST00000462658 STRBPQ96SI9 672 aaKnown RBP8.61□□□□□ -1.03
UBE4B-204ENST00000462658 RTFDC1Q9BY42 306 aaPredicted RBP8.61□□□□□ -1.03
UBE4B-204ENST00000462658 PCDHB4Q9Y5E5 795 aa8.61□□□□□ -1.03
UBE4B-204ENST00000462658 LRRC37AA6NMS7 1700 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 CCDC88AQ3V6T2 1871 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 ETV2O00321 342 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-204ENST00000462658 WNT9AO14904 365 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 MBD4O95243 580 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 KRT15P19012 456 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 PSMA5P28066 241 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 PMLP29590 882 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 PRDX5P30044 214 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 MECOMQ03112 1051 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 HABP4Q5JVS0 413 aaKnown RBP8.6□□□□□ -1.03
UBE4B-204ENST00000462658 TMED8Q6PL24 325 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-204ENST00000462658 OSTM1Q86WC4 334 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 NIM1KQ8IY84 436 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 ARRDC4Q8NCT1 418 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 SUPT20HQ8NEM7 779 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 TM6SF1Q9BZW5 370 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 ARMT1Q9H993 441 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 CTNNA3Q9UI47 895 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 FER1L6Q2WGJ9 1857 aa8.6□□□□□ -1.03
UBE4B-204ENST00000462658 FAM205AQ6ZU69 1335 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 TCRBV5S2A0A599 114 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 KRIT1O00522 736 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 KCNK3O14649 394 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 FOXP2O15409 715 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 FGAP02671 866 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 LTFP02788 710 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 APPP05067 770 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 ASGR2P07307 311 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 CYP21A2P08686 494 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 GNAT2P19087 354 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 CASTP20810 708 aaKnown RBP8.59□□□□□ -1.03
UBE4B-204ENST00000462658 YY1P25490 414 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 MC3RP41968 323 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 GYS2P54840 703 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 DLG4P78352 724 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 GSTO1P78417 241 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 KRT32Q14532 448 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 SLC9A5Q14940 896 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 GPR162Q16538 588 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 ADCK5Q3MIX3 580 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 CCDC93Q567U6 631 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 FAM47CQ5HY64 1035 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 C16orf59Q7L2K0 433 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 ADGRA1Q86SQ6 560 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 DZIP1Q86YF9 867 aaKnown RBP8.59□□□□□ -1.03
UBE4B-204ENST00000462658 RTKN2Q8IZC4 609 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 LCORLQ8N3X6 602 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 IGSF22Q8N9C0 903 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 MIGA1Q8NAN2 632 aa8.59□□□□□ -1.03
UBE4B-204ENST00000462658 SH3RF2Q8TEC5 729 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms