RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 FAM184AQ8NB25 1140 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 SMG8Q8ND04 991 aaKnown RBP8.83□□□□□ -1
CDC42BPA-210ENST00000462553 MTMR9Q96QG7 549 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 NAP1L4Q99733 375 aaKnown RBP8.83□□□□□ -1
CDC42BPA-210ENST00000462553 TMEM175Q9BSA9 504 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 HERC2P3Q9BVR0 1158 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 KRTAP3-3Q9BYR6 98 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 KRTAP3-2Q9BYR7 98 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 INO80BQ9C086 356 aaPredicted RBP8.83□□□□□ -1
CDC42BPA-210ENST00000462553 RSAD1Q9HA92 442 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 PDCD11Q14690 1871 aaKnown RBP8.83□□□□□ -1
CDC42BPA-210ENST00000462553 TPRP12270 2363 aaKnown RBP8.82□□□□□ -1
CDC42BPA-210ENST00000462553 NRP1O14786 923 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 PI15O43692 258 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 NARSO43776 548 aaKnown RBP8.82□□□□□ -1
CDC42BPA-210ENST00000462553 NEMFO60524 1076 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 PAPLNO95428 1278 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 POMCP01189 267 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 SOD2P04179 222 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 NCLP19338 710 aaKnown RBP8.82□□□□□ -1
CDC42BPA-210ENST00000462553 AOC1P19801 751 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 QARSP47897 775 aaKnown RBP8.82□□□□□ -1
CDC42BPA-210ENST00000462553 PSEN1P49768 467 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 TOB1P50616 345 aaPredicted RBP8.82□□□□□ -1
CDC42BPA-210ENST00000462553 DSC1Q08554 894 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 LAMTOR4Q0VGL1 99 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 TDGQ13569 410 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 NBR1Q14596 966 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 BMS1Q14692 1282 aaKnown RBP8.82□□□□□ -1
CDC42BPA-210ENST00000462553 EMC2Q15006 297 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 SAFBQ15424 915 aaKnown RBP eCLIP8.82□□□□□ -1
CDC42BPA-210ENST00000462553 CALCRLQ16602 461 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 C15orf39Q6ZRI6 1047 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 TAS1R1Q7RTX1 841 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 SRGAP1Q7Z6B7 1085 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 FRMD5Q7Z6J6 570 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 NOSTRINQ8IVI9 506 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 CCDC105Q8IYK2 499 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 COLGALT2Q8IYK4 626 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 CMASQ8NFW8 434 aaPredicted RBP8.82□□□□□ -1
CDC42BPA-210ENST00000462553 URGCPQ8TCY9 931 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 PRPF31Q8WWY3 499 aaKnown RBP8.82□□□□□ -1
CDC42BPA-210ENST00000462553 SPOCK2Q92563 424 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 TMEM143Q96AN5 459 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 PGBD4Q96DM1 585 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 LXNQ9BS40 222 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 EIF2AQ9BY44 585 aaKnown RBP8.82□□□□□ -1
CDC42BPA-210ENST00000462553 KCNK12Q9HB15 430 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 XPNPEP1Q9NQW7 623 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 MAN1C1Q9NR34 630 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 TCHHQ07283 1943 aa8.82□□□□□ -1
CDC42BPA-210ENST00000462553 CITO14578 2027 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 ZBTB39O15060 712 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 TEX28O15482 410 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 TSPAN1O60635 241 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 SRGAP2CP0DJJ0 459 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 KLRC2P26717 231 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 MCM7P33993 719 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 RFC5P40937 340 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 EPHA7Q15375 998 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 AMHR2Q16671 573 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 TTC38Q5R3I4 469 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 KIAA0319Q5VV43 1072 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 NCAPH2Q6IBW4 605 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 OTOP3Q7RTS5 596 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 FERMT3Q86UX7 667 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 SLFN12Q8IYM2 578 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 C4orf32Q8N8J7 132 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 FLCNQ8NFG4 579 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 PSPC1Q8WXF1 523 aaKnown RBP8.81□□□□□ -1
CDC42BPA-210ENST00000462553 SLC7A3Q8WY07 619 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 ZNF707Q96C28 371 aaPredicted RBP8.81□□□□□ -1
CDC42BPA-210ENST00000462553 ACSF2Q96CM8 615 aaPredicted RBP8.81□□□□□ -1
CDC42BPA-210ENST00000462553 CEP170P1Q96L14 293 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 ZFP42Q96MM3 310 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 RPS6KC1Q96S38 1066 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 JPH2Q9BR39 696 aaPredicted RBP8.81□□□□□ -1
CDC42BPA-210ENST00000462553 EMILIN2Q9BXX0 1053 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 RHOBTB2Q9BYZ6 727 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 MFSD1Q9H3U5 465 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 RXFP1Q9HBX9 757 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 MRPL17Q9NRX2 175 aaKnown RBP8.81□□□□□ -1
CDC42BPA-210ENST00000462553 MIOSQ9NXC5 875 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 RGL1Q9NZL6 768 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 STK39Q9UEW8 545 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 PRG3Q9Y2Y8 225 aaPredicted RBP8.81□□□□□ -1
CDC42BPA-210ENST00000462553 PPME1Q9Y570 386 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 IPPQ9Y573 584 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 F5P12259 2224 aa8.81□□□□□ -1
CDC42BPA-210ENST00000462553 CLUHO75153 1309 aa8.8□□□□□ -1
CDC42BPA-210ENST00000462553 COL4A2P08572 1712 aa8.8□□□□□ -1
CDC42BPA-210ENST00000462553 CACNA1BQ00975 2339 aa8.8□□□□□ -1
CDC42BPA-210ENST00000462553 KMT2BQ9UMN6 2715 aaPredicted RBP8.8□□□□□ -1
CDC42BPA-210ENST00000462553 KRBA1A5PL33 1030 aa8.8□□□□□ -1
CDC42BPA-210ENST00000462553 ARL5CA6NH57 179 aa8.8□□□□□ -1
CDC42BPA-210ENST00000462553 C2CD2LO14523 706 aa8.8□□□□□ -1
CDC42BPA-210ENST00000462553 RFPL2O75678 378 aa8.8□□□□□ -1
CDC42BPA-210ENST00000462553 URODP06132 367 aa8.8□□□□□ -1
CDC42BPA-210ENST00000462553 P4HBP07237 508 aaKnown RBP8.8□□□□□ -1
CDC42BPA-210ENST00000462553 ATP2B1P20020 1258 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms