RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 PDZD7Q9H5P4 517 aa10.49□□□□□ -0.73
PKP4-208ENST00000462335 SPG21Q9NZD8 308 aa10.49□□□□□ -0.73
PKP4-208ENST00000462335 KLK14Q9P0G3 267 aa10.49□□□□□ -0.73
PKP4-208ENST00000462335 SERTAD1Q9UHV2 236 aa10.49□□□□□ -0.73
PKP4-208ENST00000462335 TBX20Q9UMR3 447 aa10.49□□□□□ -0.73
PKP4-208ENST00000462335 TNFSF13BQ9Y275 285 aa10.49□□□□□ -0.73
PKP4-208ENST00000462335 FAN1Q9Y2M0 1017 aa10.49□□□□□ -0.73
PKP4-208ENST00000462335 HES2Q9Y543 173 aa10.49□□□□□ -0.73
PKP4-208ENST00000462335 A0A1W2PQ27 194 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 A0A1W2PQ64 194 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 A0A1W2PQD8 194 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 ARL5CA6NH57 179 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 H3BNC9 293 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 RBAK-RBAKDNI3L0D1 243 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 OFD1O75665 1012 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 TOM1L1O75674 476 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 NMT1P30419 496 aaKnown RBP10.48□□□□□ -0.73
PKP4-208ENST00000462335 OR1G1P47890 313 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 OSTNP61366 133 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 MAPK7Q13164 816 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 POSTNQ15063 836 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 AMHR2Q16671 573 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 CLLU1OSQ5K130 101 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 UBXN11Q5T124 520 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 L1TD1Q5T7N2 865 aaKnown RBP10.48□□□□□ -0.73
PKP4-208ENST00000462335 NT5DC1Q5TFE4 455 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 KCNT2Q6UVM3 1135 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 ZPBP2Q6X784 338 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 ZNF598Q86UK7 904 aaKnown RBP10.48□□□□□ -0.73
PKP4-208ENST00000462335 KLHL23Q8NBE8 558 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 COLGALT1Q8NBJ5 622 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 TMEM161BQ8NDZ6 487 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 CLP1Q92989 425 aaKnown RBP10.48□□□□□ -0.73
PKP4-208ENST00000462335 FAM212AQ96EL1 285 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 GUCD1Q96NT3 240 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 COLEC11Q9BWP8 271 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 CCDC113Q9H0I3 377 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 NXF3Q9H4D5 531 aaKnown RBP10.48□□□□□ -0.73
PKP4-208ENST00000462335 EXOC1Q9NV70 894 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 SNTG2Q9NY99 539 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 LMCD1Q9NZU5 365 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 ARHGAP28Q9P2N2 729 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 USP20Q9Y2K6 914 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 TCHHQ07283 1943 aa10.48□□□□□ -0.73
PKP4-208ENST00000462335 A0A087X0B3 334 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 FGF18O76093 207 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 THP07101 528 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 MCF2P10911 925 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 MLH1P40692 756 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 ZNF131P52739 623 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 NCKAP1LP55160 1127 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 BCAR1P56945 870 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 HSP90AA2PQ14568 343 aaPredicted RBP10.47□□□□□ -0.73
PKP4-208ENST00000462335 NOLC1Q14978 699 aaKnown RBP eCLIP10.47□□□□□ -0.73
PKP4-208ENST00000462335 KIAA1841Q6NSI8 718 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 AGMOQ6ZNB7 445 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 ZNF720Q7Z2F6 126 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 POMGNT1Q8WZA1 660 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 P2RX5Q93086 422 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 HVCN1Q96D96 273 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 MRPL38Q96DV4 380 aaKnown RBP10.47□□□□□ -0.73
PKP4-208ENST00000462335 CHAMP1Q96JM3 812 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 IPO9Q96P70 1041 aaKnown RBP10.47□□□□□ -0.73
PKP4-208ENST00000462335 C7orf25Q9BPX7 421 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 MSTO1Q9BUK6 570 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 LMAN2LQ9H0V9 348 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 BLZF1Q9H2G9 400 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 TMEM206Q9H813 350 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 ALG13Q9NP73 1137 aaKnown RBP10.47□□□□□ -0.73
PKP4-208ENST00000462335 ENTPD7Q9NQZ7 604 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 TBC1D13Q9NVG8 400 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 KBTBD4Q9NVX7 518 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 STK39Q9UEW8 545 aa10.47□□□□□ -0.73
PKP4-208ENST00000462335 R3HCC1Q9Y3T6 440 aaKnown RBP10.47□□□□□ -0.73
PKP4-208ENST00000462335 PTPRSQ13332 1948 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 GOLGA6L22H0YM25 854 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 KINO60870 393 aaKnown RBP10.46□□□□□ -0.73
PKP4-208ENST00000462335 TADA2AO75478 443 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 RECQL4O94761 1208 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 ARHGEF15O94989 841 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 ZNF202O95125 648 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 KIF20AO95235 890 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 SMC2O95347 1197 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 MYL1P05976 194 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 ATF7P17544 494 aaPredicted RBP10.46□□□□□ -0.73
PKP4-208ENST00000462335 SCNN1GP51170 649 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 NDUFA8P51970 172 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 UBE3AQ05086 875 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 TIGD5Q53EQ6 642 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 ZC2HC1CQ53FD0 456 aaPredicted RBP10.46□□□□□ -0.73
PKP4-208ENST00000462335 EEF1DP3Q658K8 133 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 PDE12Q6L8Q7 609 aaKnown RBP10.46□□□□□ -0.73
PKP4-208ENST00000462335 TMC7Q7Z402 723 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 CRIPAKQ8N1N5 446 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 SMG8Q8ND04 991 aaKnown RBP10.46□□□□□ -0.73
PKP4-208ENST00000462335 PAGE5Q96GU1 130 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 TMEM175Q9BSA9 504 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 TRIM9Q9C026 710 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 RNF39Q9H2S5 420 aa10.46□□□□□ -0.73
PKP4-208ENST00000462335 RPF1Q9H9Y2 349 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms