RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 GSTTP1A0A1W2PQM5 241 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 ZSCAN5CA6NGD5 496 aaPredicted RBP13.46□□□□□ -0.26
COL4A6-204ENST00000461897 CCDC188H7C350 402 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 CLIC2O15247 247 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 AKAP3O75969 853 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 GGPS1O95749 300 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 MAPTP10636 758 aaKnown RBP13.46□□□□□ -0.26
COL4A6-204ENST00000461897 NEDD9Q14511 834 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 EXOC3L4Q17RC7 722 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 FAM102BQ5T8I3 360 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 METTL7BQ6UX53 244 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 STXBP4Q6ZWJ1 553 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 B4GALNT4Q76KP1 1039 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 TPCN2Q8NHX9 752 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 ATP6V1G3Q96LB4 118 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 PCYT2Q99447 389 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 PARK7Q99497 189 aaKnown RBP13.46□□□□□ -0.26
COL4A6-204ENST00000461897 SIX2Q9NPC8 291 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 ZNF302Q9NR11 478 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 SUCLA2Q9P2R7 463 aaPredicted RBP13.46□□□□□ -0.26
COL4A6-204ENST00000461897 PCDHB13Q9Y5F0 798 aa13.46□□□□□ -0.26
COL4A6-204ENST00000461897 LOC102724159A0A0B4J2E5 919 aa13.45□□□□□ -0.26
COL4A6-204ENST00000461897 KRT14P02533 472 aa13.45□□□□□ -0.26
COL4A6-204ENST00000461897 SLC9A1P19634 815 aa13.45□□□□□ -0.26
COL4A6-204ENST00000461897 ADORA2AP29274 412 aa13.45□□□□□ -0.26
COL4A6-204ENST00000461897 CASP4P49662 377 aa13.45□□□□□ -0.26
COL4A6-204ENST00000461897 SOX10P56693 466 aa13.45□□□□□ -0.26
COL4A6-204ENST00000461897 PWP2Q15269 919 aaKnown RBP13.45□□□□□ -0.26
COL4A6-204ENST00000461897 XKR3Q5GH77 459 aa13.45□□□□□ -0.26
COL4A6-204ENST00000461897 ALKBH5Q6P6C2 394 aaKnown RBP13.45□□□□□ -0.26
COL4A6-204ENST00000461897 SEC14L1Q92503 715 aa13.45□□□□□ -0.26
COL4A6-204ENST00000461897 XPNPEP1Q9NQW7 623 aa13.45□□□□□ -0.26
COL4A6-204ENST00000461897 PDLIM7Q9NR12 457 aa13.45□□□□□ -0.26
COL4A6-204ENST00000461897 CYP26B1Q9NR63 512 aa13.45□□□□□ -0.26
COL4A6-204ENST00000461897 GGA2Q9UJY4 613 aa13.45□□□□□ -0.26
COL4A6-204ENST00000461897 TTC7AQ9ULT0 858 aaPredicted RBP13.45□□□□□ -0.26
COL4A6-204ENST00000461897 ESYT3A0FGR9 886 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 H0YGN5 161 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 KCNK3O14649 394 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 OATP04181 439 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 ACTN1P12814 892 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 XRCC5P13010 732 aaKnown RBP13.44□□□□□ -0.26
COL4A6-204ENST00000461897 NR1D1P20393 614 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 RPL13P26373 211 aaKnown RBP13.44□□□□□ -0.26
COL4A6-204ENST00000461897 NCKAP1LP55160 1127 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 PEX3P56589 373 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 ZNF792Q3KQV3 632 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 CCDC62Q6P9F0 684 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 YTHDF3Q7Z739 585 aaKnown RBP13.44□□□□□ -0.26
COL4A6-204ENST00000461897 RASAL3Q86YV0 1011 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 LMBR1Q8WVP7 490 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 IFT81Q8WYA0 676 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 BSNDQ8WZ55 320 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 SLC35C1Q96A29 364 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 LRRC45Q96CN5 670 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 BORCS6Q96GS4 357 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 SPAG5Q96R06 1193 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.44□□□□□ -0.26
COL4A6-204ENST00000461897 EPN3Q9H201 632 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 ST6GALNAC4Q9H4F1 302 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 TMBIM4Q9HC24 238 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 AGPAT3Q9NRZ7 376 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 PACSIN2Q9UNF0 486 aaPredicted RBP13.44□□□□□ -0.26
COL4A6-204ENST00000461897 DAAM1Q9Y4D1 1078 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 NFS1Q9Y697 457 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 PGRMC1O00264 195 aaKnown RBP13.44□□□□□ -0.26
COL4A6-204ENST00000461897 DGAT1O75907 488 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 LSP1P33241 339 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 GTF2BQ00403 316 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 ARID5AQ03989 594 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 PDCLQ13371 301 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 ALCAMQ13740 583 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 FAM110CQ1W6H9 321 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 MTERF2Q49AM1 385 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 TMEM63BQ5T3F8 832 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 KCNV1Q6PIU1 500 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 ARMCX2Q7L311 632 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 SYCE1Q8N0S2 351 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 ABRAQ8N0Z2 381 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 SH2D3CQ8N5H7 860 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 OLIG1Q8TAK6 271 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 RNPC3Q96LT9 517 aaKnown RBP13.44□□□□□ -0.26
COL4A6-204ENST00000461897 SLITRK6Q9H5Y7 841 aa13.44□□□□□ -0.26
COL4A6-204ENST00000461897 ASB14A6NK59 587 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 SLC16A4O15374 487 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 FERP16591 822 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 TCF7P36402 384 aaPredicted RBP13.43□□□□□ -0.26
COL4A6-204ENST00000461897 NPTX2P47972 431 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 HSDL1Q3SXM5 330 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 CELF3Q5SZQ8 465 aaKnown RBP13.43□□□□□ -0.26
COL4A6-204ENST00000461897 HS2ST1Q7LGA3 356 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 HAUS6Q7Z4H7 955 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 VPS36Q86VN1 386 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 SUGP1Q8IWZ8 645 aaKnown RBP13.43□□□□□ -0.26
COL4A6-204ENST00000461897 METTL13Q8N6R0 699 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 C3orf20Q8ND61 904 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 SLC30A5Q8TAD4 765 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 SEPT1Q8WYJ6 367 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 KIFAP3Q92845 792 aa13.43□□□□□ -0.26
COL4A6-204ENST00000461897 CEP89Q96ST8 783 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms