RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 GPC3P51654 580 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 VAV2P52735 878 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 PTK2Q05397 1052 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 CKAP4Q07065 602 aaKnown RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 CYP24A1Q07973 514 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 MFSD10Q14728 455 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 DUOXA2Q1HG44 320 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 TEX35Q5T0J7 233 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 LMBRD2Q68DH5 695 aaPredicted RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 TRIM65Q6PJ69 517 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 MPZL3Q6UWV2 235 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 MAMDC4Q6UXC1 1216 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 ENOSF1Q7L5Y1 443 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 SYN2Q92777 582 aaPredicted RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 EIF3CQ99613 913 aaKnown RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 NTPCRQ9BSD7 190 aaKnown RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 STK33Q9BYT3 514 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 R3HDMLQ9H3Y0 253 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 PDE11AQ9HCR9 933 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 TOPORSQ9NS56 1045 aaPredicted RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 MYO1AQ9UBC5 1043 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 MYO6Q9UM54 1294 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 COL1A2P08123 1366 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 DICER1Q9UPY3 1922 aaKnown RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 A0A087WZ62 844 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 C17orf102A2RUQ5 167 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 ACKR2O00590 384 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 MAPK13O15264 365 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 PPP1R37O75864 691 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 TBC1D8O95759 1140 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 SNAI1O95863 264 aaPredicted RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 VTNP04004 478 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 ANXA13P27216 316 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 GTF2H1P32780 548 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 SOX5P35711 763 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 SSR1P43307 286 aaKnown RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 TMEM62Q0P6H9 643 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 NFX1Q12986 1120 aaKnown RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 TUBB2AQ13885 445 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 KIZQ2M2Z5 673 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 TAF3Q5VWG9 929 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 C17orf99Q6UX52 265 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 MSANTD4Q8NCY6 345 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 TRIM58Q8NG06 486 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 MORC4Q8TE76 937 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 FDXACB1Q9BRP7 624 aaPredicted RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 MTG1Q9BT17 334 aaPredicted RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 TUBB2BQ9BVA1 445 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 SYNCQ9H7C4 482 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 RAB20Q9NX57 234 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 USP20Q9Y2K6 914 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 PCDHB4Q9Y5E5 795 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 PCDHA13Q9Y5I0 950 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 SCN4AP35499 1836 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 IGKV6D-21A0A0A0MT36 114 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 A0A0U1RQG5 324 aaPredicted RBP4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 RIOK3O14730 519 aaKnown RBP4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 HLA-DRAP01903 254 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 ABCB4P21439 1286 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 BEX3Q00994 111 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 CCL14Q16627 93 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 C10orf76Q5T2E6 689 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 TWF2Q6IBS0 349 aaKnown RBP4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 TAPT1Q6NXT6 567 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 NFRKBQ6P4R8 1299 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 ALKBH5Q6P6C2 394 aaKnown RBP4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 RNF180Q86T96 592 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 CDR2LQ86X02 465 aaPredicted RBP4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 SLC35F6Q8N357 371 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 RNF169Q8NCN4 708 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 PARD3BQ8TEW8 1205 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 ERO1AQ96HE7 468 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 PCYT2Q99447 389 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 RNPEPQ9H4A4 650 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 XPNPEP3Q9NQH7 507 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 DMAC2Q9NW81 257 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 CTTNBP2NLQ9P2B4 639 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 NXF1Q9UBU9 619 aaKnown RBP4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 PARP2Q9UGN5 583 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 TELO2Q9Y4R8 837 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 NRCAMQ92823 1304 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 ATAD5Q96QE3 1844 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 CTAGE15A4D2H0 777 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 TLR3O15455 904 aaKnown RBP4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 AOC2O75106 756 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 IL18RAPO95256 599 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 ADRB2P07550 413 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 CLTAP09496 248 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 CTAGE8P0CG41 777 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 SMIM10L2AP0DMW4 78 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 SMIM10L2BP0DMW5 78 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 ATF7P17544 494 aaPredicted RBP4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 DESP17661 470 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 ATP4AP20648 1035 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 TBXAS1P24557 533 aaPredicted RBP4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 HOXD13P35453 343 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 CETN2P41208 172 aa4.44□□□□□ -1.7
ATP13A3-206ENST00000461660 PTENP60484 403 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms