RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 SF3B1O75533 1304 aaKnown RBP eCLIP16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 NCOR2Q9Y618 2525 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 CCDC195A0A1B0GUA6 201 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 POMCP01189 267 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 ID4P47928 161 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 MBTD1Q05BQ5 628 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 HTR4Q13639 388 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 USP41Q3LFD5 358 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 FUT10Q6P4F1 479 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 PPP4R3CPQ6ZMV5 832 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 RTL10Q7L3V2 364 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 SMG7Q92540 1137 aaKnown RBP16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 TMEM143Q96AN5 459 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 PRKD2Q9BZL6 878 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 XPNPEP1Q9NQW7 623 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 ARHGEF3Q9NR81 526 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 DLGAP2Q9P1A6 1054 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 FBXW11Q9UKB1 542 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 ADAM28Q9UKQ2 775 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 CYP46A1Q9Y6A2 500 aa16.2■□□□□ 0.18
DNMT3A-207ENST00000461228 CACNA1IQ9P0X4 2223 aa16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 KRBA1A5PL33 1030 aa16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 LMNAP02545 664 aaKnown RBP16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 HNRNPA1P09651 372 aaKnown RBP eCLIP16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 MAGEA9P43362 315 aa16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 LONRF3Q496Y0 759 aa16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 PDXDC1Q6P996 788 aa16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 SLC27A1Q6PCB7 646 aa16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 LILRA6Q6PI73 481 aa16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 SLC44A3Q8N4M1 653 aa16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 GSTCDQ8NEC7 633 aa16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 FEZF2Q8TBJ5 459 aa16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 COLEC11Q9BWP8 271 aa16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 TBC1D17Q9HA65 648 aa16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 ANKEF1Q9NU02 776 aa16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 PRG3Q9Y2Y8 225 aaPredicted RBP16.19■□□□□ 0.18
DNMT3A-207ENST00000461228 EPG5Q9HCE0 2579 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 TGM5O43548 720 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 PI15O43692 258 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 ZMYND10O75800 440 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 SSBP05455 408 aaKnown RBP eCLIP16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 SRGAP2CP0DJJ0 459 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 LAMP2P13473 410 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 GBP2P32456 591 aaPredicted RBP16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 OR1G1P47890 313 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 SCNN1GP51170 649 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 CAPSQ13938 189 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 ZNF528Q3MIS6 628 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 CDCA2Q69YH5 1023 aaPredicted RBP16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 ZNF579Q8NAF0 562 aaKnown RBP16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 PIK3R5Q8WYR1 880 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 ZFP42Q96MM3 310 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 MYADMQ96S97 322 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 GAD1Q99259 594 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 EIF2AQ9BY44 585 aaKnown RBP16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 OSBPL6Q9BZF3 934 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 TRIM6Q9C030 488 aaPredicted RBP16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 NT5C3AQ9H0P0 336 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 COL4A2P08572 1712 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 GPR179Q6PRD1 2367 aa16.18■□□□□ 0.18
DNMT3A-207ENST00000461228 A0A1B0GUA9 196 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 C2CD2LO14523 706 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 NARSO43776 548 aaKnown RBP16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 CCNT1O60563 726 aaKnown RBP16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 RFPL2O75678 378 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 ARF4P18085 180 aaPredicted RBP16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 ARL2P36404 184 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 STARD6P59095 220 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 ELAVL2Q12926 359 aaKnown RBP16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 FAM187BQ17R55 369 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 XKR9Q5GH70 373 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 RSPO2Q6UXX9 243 aaPredicted RBP16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 MTSS1LQ765P7 747 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 PJA1Q8NG27 643 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 SHDQ96IW2 340 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 HSD17B14Q9BPX1 270 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 DDX23Q9BUQ8 820 aaKnown RBP16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 NXF3Q9H4D5 531 aaKnown RBP16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 DOCK6Q96HP0 2047 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 NOTCH4Q99466 2003 aa16.17■□□□□ 0.18
DNMT3A-207ENST00000461228 INO80B-WBP1J3KQ70 363 aa16.16■□□□□ 0.18
DNMT3A-207ENST00000461228 SPTLC1O15269 473 aa16.16■□□□□ 0.18
DNMT3A-207ENST00000461228 XRCC6P12956 609 aaKnown RBP eCLIP16.16■□□□□ 0.18
DNMT3A-207ENST00000461228 RARRES1P49788 294 aa16.16■□□□□ 0.18
DNMT3A-207ENST00000461228 TUSC3Q13454 348 aa16.16■□□□□ 0.18
DNMT3A-207ENST00000461228 WASF1Q92558 559 aa16.16■□□□□ 0.18
DNMT3A-207ENST00000461228 TMEM189-UBE2V1I3L0A0 370 aa16.15■□□□□ 0.18
DNMT3A-207ENST00000461228 SLITRK3O94933 977 aa16.15■□□□□ 0.18
DNMT3A-207ENST00000461228 BAG4O95429 457 aaKnown RBP16.15■□□□□ 0.18
DNMT3A-207ENST00000461228 CFHP08603 1231 aa16.15■□□□□ 0.18
DNMT3A-207ENST00000461228 RFX1P22670 979 aa16.15■□□□□ 0.18
DNMT3A-207ENST00000461228 PRKCQQ04759 706 aa16.15■□□□□ 0.18
DNMT3A-207ENST00000461228 HSP90AA2PQ14568 343 aaPredicted RBP16.15■□□□□ 0.18
DNMT3A-207ENST00000461228 PDCD11Q14690 1871 aaKnown RBP16.15■□□□□ 0.18
DNMT3A-207ENST00000461228 NCAPH2Q6IBW4 605 aa16.15■□□□□ 0.18
DNMT3A-207ENST00000461228 TAS1R1Q7RTX1 841 aa16.15■□□□□ 0.18
DNMT3A-207ENST00000461228 MCPH1Q8NEM0 835 aa16.15■□□□□ 0.18
DNMT3A-207ENST00000461228 GPR152Q8TDT2 470 aa16.15■□□□□ 0.18
DNMT3A-207ENST00000461228 TNFRSF25Q93038 417 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms