RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 DPCR1Q3MIW9 517 aa15.78■□□□□ 0.12
COL5A3-202ENST00000461214 OTOP2Q7RTS6 562 aa15.78■□□□□ 0.12
COL5A3-202ENST00000461214 APBB1IPQ7Z5R6 666 aaPredicted RBP15.78■□□□□ 0.12
COL5A3-202ENST00000461214 ADSSL1Q8N142 457 aa15.78■□□□□ 0.12
COL5A3-202ENST00000461214 GOLGA5Q8TBA6 731 aa15.78■□□□□ 0.12
COL5A3-202ENST00000461214 HERVK_113Q902F9 699 aa15.78■□□□□ 0.12
COL5A3-202ENST00000461214 DHTKD1Q96HY7 919 aaPredicted RBP15.78■□□□□ 0.12
COL5A3-202ENST00000461214 FTHL17Q9BXU8 183 aa15.78■□□□□ 0.12
COL5A3-202ENST00000461214 IFIH1Q9BYX4 1025 aaKnown RBP15.78■□□□□ 0.12
COL5A3-202ENST00000461214 GBP3Q9H0R5 595 aa15.78■□□□□ 0.12
COL5A3-202ENST00000461214 TYW1Q9NV66 732 aaKnown RBP15.78■□□□□ 0.12
COL5A3-202ENST00000461214 NOC2LQ9Y3T9 749 aaKnown RBP15.78■□□□□ 0.12
COL5A3-202ENST00000461214 N4BP3O15049 544 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 NBNO60934 754 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 PRPF6O94906 941 aaKnown RBP15.77■□□□□ 0.12
COL5A3-202ENST00000461214 LIG4P49917 911 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 LRRC63Q05C16 580 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 PLEKHG4Q58EX7 1191 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 NOTUMQ6P988 496 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 HS2ST1Q7LGA3 356 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 SMYD4Q8IYR2 804 aaPredicted RBP15.77■□□□□ 0.12
COL5A3-202ENST00000461214 SYCP3Q8IZU3 236 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 BICD1Q96G01 975 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 ANP32EQ9BTT0 268 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 FUCA2Q9BTY2 467 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 MTIF3Q9H2K0 278 aaKnown RBP15.77■□□□□ 0.12
COL5A3-202ENST00000461214 KCTD10Q9H3F6 313 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 CERS4Q9HA82 394 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 CHST12Q9NRB3 414 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 PADI3Q9ULW8 664 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 TNFSF13BQ9Y275 285 aa15.77■□□□□ 0.12
COL5A3-202ENST00000461214 BICDL2A1A5D9 508 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 PDXKO00764 312 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 KIAA0391O15091 583 aaKnown RBP15.76■□□□□ 0.11
COL5A3-202ENST00000461214 TOM1L1O75674 476 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 FGBP02675 491 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 EDN1P05305 212 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 ARF4P18085 180 aaPredicted RBP15.76■□□□□ 0.11
COL5A3-202ENST00000461214 PROZP22891 400 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 CD52P31358 61 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 HOXD13P35453 343 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 CCL23P55773 120 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 PAK1Q13153 545 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 HSP90AA2PQ14568 343 aaPredicted RBP15.76■□□□□ 0.11
COL5A3-202ENST00000461214 NFIL3Q16649 462 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 ATF7IP2Q5U623 682 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 ISM2Q6H9L7 571 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 SLFN12LQ6IEE8 588 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 MPZL3Q6UWV2 235 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 NELFCDQ8IXH7 590 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 C12orf56Q8IXR9 622 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 TMEM174Q8WUU8 243 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 SEPT8Q92599 483 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 SCLYQ96I15 445 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 ACO2Q99798 780 aaKnown RBP15.76■□□□□ 0.11
COL5A3-202ENST00000461214 ADPGKQ9BRR6 497 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 AGO3Q9H9G7 860 aaKnown RBP15.76■□□□□ 0.11
COL5A3-202ENST00000461214 IL23AQ9NPF7 189 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 ST3GAL5Q9UNP4 418 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 TRAF3IP3Q9Y228 551 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 PIN4Q9Y237 131 aaKnown RBP15.76■□□□□ 0.11
COL5A3-202ENST00000461214 STYXL1Q9Y6J8 313 aa15.76■□□□□ 0.11
COL5A3-202ENST00000461214 A0A1B0GUA9 196 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 PPP1R3GB7ZBB8 358 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 B4GALT5O43286 388 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 TLL1O43897 1013 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 CSDE1O75534 798 aaKnown RBP15.75■□□□□ 0.11
COL5A3-202ENST00000461214 CAVIN2O95810 425 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 CD44P16070 742 aaKnown RBP15.75■□□□□ 0.11
COL5A3-202ENST00000461214 GARTP22102 1010 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 CCNE1P24864 410 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 ERCC5P28715 1186 aaPredicted RBP15.75■□□□□ 0.11
COL5A3-202ENST00000461214 RAB27AP51159 221 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 KCNA1Q09470 495 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 NOLC1Q14978 699 aaKnown RBP eCLIP15.75■□□□□ 0.11
COL5A3-202ENST00000461214 TMEM132AQ24JP5 1023 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 EDRF1Q3B7T1 1238 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 DCAF4L1Q3SXM0 396 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 ZCWPW2Q504Y3 356 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 CENPPQ6IPU0 288 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 CNKSR3Q6P9H4 555 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 SLC27A1Q6PCB7 646 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 RPUSD2Q8IZ73 545 aaKnown RBP15.75■□□□□ 0.11
COL5A3-202ENST00000461214 P2RX5Q93086 422 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 TSG101Q99816 390 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 TRAIPQ9BWF2 469 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 NAT10Q9H0A0 1025 aaKnown RBP15.75■□□□□ 0.11
COL5A3-202ENST00000461214 PDZD7Q9H5P4 517 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 MAPK8IP1Q9UQF2 711 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 COL4A6Q14031 1691 aa15.75■□□□□ 0.11
COL5A3-202ENST00000461214 MUC6Q6W4X9 2439 aa15.74■□□□□ 0.11
COL5A3-202ENST00000461214 TGFB1I1O43294 461 aa15.74■□□□□ 0.11
COL5A3-202ENST00000461214 CALUO43852 315 aaPredicted RBP15.74■□□□□ 0.11
COL5A3-202ENST00000461214 FGFR4P22455 802 aa15.74■□□□□ 0.11
COL5A3-202ENST00000461214 HOXA11P31270 313 aaPredicted RBP15.74■□□□□ 0.11
COL5A3-202ENST00000461214 ZNF445P59923 1031 aa15.74■□□□□ 0.11
COL5A3-202ENST00000461214 NFX1Q12986 1120 aaKnown RBP15.74■□□□□ 0.11
COL5A3-202ENST00000461214 MYBPC2Q14324 1141 aa15.74■□□□□ 0.11
COL5A3-202ENST00000461214 GPNMBQ14956 572 aa15.74■□□□□ 0.11
COL5A3-202ENST00000461214 ZNF568Q3ZCX4 644 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms