RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 SPATA31C1P0DKV0 1188 aa16.32■□□□□ 0.2
SMPD4-216ENST00000461187 XRCC6P12956 609 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMPD4-216ENST00000461187 NEK4P51957 841 aa16.32■□□□□ 0.2
SMPD4-216ENST00000461187 ST3GAL1Q11201 340 aa16.32■□□□□ 0.2
SMPD4-216ENST00000461187 C15orf39Q6ZRI6 1047 aa16.32■□□□□ 0.2
SMPD4-216ENST00000461187 CCDC149Q6ZUS6 474 aa16.32■□□□□ 0.2
SMPD4-216ENST00000461187 CMASQ8NFW8 434 aaPredicted RBP16.32■□□□□ 0.2
SMPD4-216ENST00000461187 ACSF2Q96CM8 615 aaPredicted RBP16.32■□□□□ 0.2
SMPD4-216ENST00000461187 CCDC43Q96MW1 224 aaKnown RBP16.32■□□□□ 0.2
SMPD4-216ENST00000461187 TRIM6Q9C030 488 aaPredicted RBP16.32■□□□□ 0.2
SMPD4-216ENST00000461187 POLR3FQ9H1D9 316 aaPredicted RBP16.32■□□□□ 0.2
SMPD4-216ENST00000461187 RXFP1Q9HBX9 757 aa16.32■□□□□ 0.2
SMPD4-216ENST00000461187 MAN1C1Q9NR34 630 aa16.32■□□□□ 0.2
SMPD4-216ENST00000461187 SSX2IPQ9Y2D8 614 aa16.32■□□□□ 0.2
SMPD4-216ENST00000461187 MIA3Q5JRA6 1907 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 A0A1B0GUA9 196 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 TEX28O15482 410 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 USO1O60763 962 aaKnown RBP16.31■□□□□ 0.2
SMPD4-216ENST00000461187 ADH1AP07327 375 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 AKAP5P24588 427 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 GLUD2P49448 558 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 NUBP1P53384 320 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 DSG1Q02413 1049 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 TRIM29Q14134 588 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 SLC27A1Q6PCB7 646 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 OTOP3Q7RTS5 596 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 CDR2LQ86X02 465 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-216ENST00000461187 GPRC5CQ9NQ84 441 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 CHST7Q9NS84 486 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 FAM86C1Q9NVL1 165 aa16.31■□□□□ 0.2
SMPD4-216ENST00000461187 ZMYM2Q9UBW7 1377 aa16.3■□□□□ 0.2
SMPD4-216ENST00000461187 FANCMQ8IYD8 2048 aa16.3■□□□□ 0.2
SMPD4-216ENST00000461187 NPTXRO95502 500 aa16.3■□□□□ 0.2
SMPD4-216ENST00000461187 CATSPER3Q86XQ3 398 aa16.3■□□□□ 0.2
SMPD4-216ENST00000461187 HACE1Q8IYU2 909 aa16.3■□□□□ 0.2
SMPD4-216ENST00000461187 TMEM105Q8N8V8 129 aa16.3■□□□□ 0.2
SMPD4-216ENST00000461187 COLEC11Q9BWP8 271 aa16.3■□□□□ 0.2
SMPD4-216ENST00000461187 GPR62Q9BZJ7 368 aa16.3■□□□□ 0.2
SMPD4-216ENST00000461187 IRF2BPLQ9H1B7 796 aa16.3■□□□□ 0.2
SMPD4-216ENST00000461187 TUFT1Q9NNX1 390 aa16.3■□□□□ 0.2
SMPD4-216ENST00000461187 PPP4R2Q9NY27 417 aa16.3■□□□□ 0.2
SMPD4-216ENST00000461187 DMDP11532 3685 aa16.3■□□□□ 0.2
SMPD4-216ENST00000461187 SPTBN4Q9H254 2564 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 CCDC195A0A1B0GUA6 201 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 LRRIQ4A6NIV6 560 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 GALR2O43603 387 aaPredicted RBP16.29■□□□□ 0.2
SMPD4-216ENST00000461187 N4BP1O75113 896 aaKnown RBP16.29■□□□□ 0.2
SMPD4-216ENST00000461187 MED24O75448 989 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 NR1I2O75469 434 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 GLUD1P00367 558 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 ATP2B1P20020 1258 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 MCM7P33993 719 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 GRIK3Q13003 919 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 FUT10Q6P4F1 479 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 MAEAQ7L5Y9 396 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 B3GALT6Q96L58 329 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 RHOBTB2Q9BYZ6 727 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 KLK14Q9P0G3 267 aa16.29■□□□□ 0.2
SMPD4-216ENST00000461187 H0Y858 1186 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 RFPL2O75678 378 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 PAPLNO95428 1278 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 MYBP10242 640 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 GUCY1B3Q02153 619 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 TDGQ13569 410 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 FAM187BQ17R55 369 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 CDCA2Q69YH5 1023 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-216ENST00000461187 ASTLQ6HA08 431 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-216ENST00000461187 CYP26C1Q6V0L0 522 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 GPR65Q8IYL9 337 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 MCPH1Q8NEM0 835 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 RABGGTAQ92696 567 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 ATOH1Q92858 354 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-216ENST00000461187 PRIMPOLQ96LW4 560 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 POLR3CQ9BUI4 534 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-216ENST00000461187 FZD8Q9H461 694 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 KCNK12Q9HB15 430 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 WDR6Q9NNW5 1121 aaKnown RBP16.28■□□□□ 0.2
SMPD4-216ENST00000461187 PRMT7Q9NVM4 692 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-216ENST00000461187 CACNG4Q9UBN1 327 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 PARP2Q9UGN5 583 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 DPP7Q9UHL4 492 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 ADAM28Q9UKQ2 775 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 CACNA1IQ9P0X4 2223 aa16.28■□□□□ 0.2
SMPD4-216ENST00000461187 TTLL13PA6NNM8 815 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 SEC24BO95487 1268 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 C1RP00736 705 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 SPATA31D3P0C874 917 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 CLCN5P51795 746 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 USP41Q3LFD5 358 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 ELMSAN1Q6PJG2 1045 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 SPATA31D4Q6ZUB0 917 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 PALB2Q86YC2 1186 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 HDAC7Q8WUI4 952 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 BSNDQ8WZ55 320 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 ZNF707Q96C28 371 aaPredicted RBP16.27■□□□□ 0.2
SMPD4-216ENST00000461187 NACC1Q96RE7 527 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 FNIP2Q9P278 1114 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 DUSP12Q9UNI6 340 aa16.27■□□□□ 0.2
SMPD4-216ENST00000461187 CLUHO75153 1309 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms