RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TAP1Q03518 808 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 FAM160A1Q05DH4 1040 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 BTG3Q14201 252 aaPredicted RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 LONRF3Q496Y0 759 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 HERC4Q5GLZ8 1057 aaPredicted RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 NT5DC1Q5TFE4 455 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 KANK3Q6NY19 840 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 GLB1LQ6UWU2 654 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 UNC13DQ70J99 1090 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 FIBCD1Q8N539 461 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 STAMQ92783 540 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 PAGE5Q96GU1 130 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 ACO2Q99798 780 aaKnown RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 EIF2AQ9BY44 585 aaKnown RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 MRPL9Q9BYD2 267 aaKnown RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 ZNF576Q9H609 170 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 MRPL44Q9H9J2 332 aaKnown RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 TBX20Q9UMR3 447 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 IPPQ9Y573 584 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 LAMA2P24043 3122 aaKnown RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 PVALEFA0A1B0GWK0 134 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 GTPBP6O43824 516 aaPredicted RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 ZNF202O95125 648 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 NPTXRO95502 500 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 PIGRP01833 764 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 PTMAP06454 111 aaKnown RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 FGFR1P11362 822 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 COASYQ13057 564 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 SYCP1Q15431 976 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 UVSSAQ2YD98 709 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 CLLU1OSQ5K130 101 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 DNTTIP2Q5QJE6 756 aaKnown RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 KRBA2Q6ZNG9 492 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 STXBP4Q6ZWJ1 553 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 ZNF720Q7Z2F6 126 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 MAP4K3Q8IVH8 894 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 FMR1NBQ8N0W7 255 aaPredicted RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 LRRC43Q8N309 656 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 SMG8Q8ND04 991 aaKnown RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 ZNF830Q96NB3 372 aaPredicted RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 TGS1Q96RS0 853 aaKnown RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 RNF19AQ9NV58 838 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 OGFRQ9NZT2 677 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 CHD9Q3L8U1 2897 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 TBKBP1A7MCY6 615 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 INPPL1O15357 1258 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 TOM1L1O75674 476 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 PPP1R37O75864 691 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 MCF2P10911 925 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 ITGA4P13612 1032 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 PROZP22891 400 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 NMT1P30419 496 aaKnown RBP12.13□□□□□ -0.47
APTX-209ENST00000460940 AFMP43652 599 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 ERVK-21P61565 698 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 NOLC1Q14978 699 aaKnown RBP eCLIP12.13□□□□□ -0.47
APTX-209ENST00000460940 ZNF568Q3ZCX4 644 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 MPZL3Q6UWV2 235 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 CLP1Q92989 425 aaKnown RBP12.13□□□□□ -0.47
APTX-209ENST00000460940 BICD1Q96G01 975 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 TARS2Q9BW92 718 aaKnown RBP12.13□□□□□ -0.47
APTX-209ENST00000460940 TTYH1Q9H313 450 aaPredicted RBP12.13□□□□□ -0.47
APTX-209ENST00000460940 RSAD1Q9HA92 442 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 PTPRHQ9HD43 1115 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 EXOC7Q9UPT5 735 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 PCDHB13Q9Y5F0 798 aa12.13□□□□□ -0.47
APTX-209ENST00000460940 UBE4BO95155 1302 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 CCDC66A2RUB6 948 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 CARNS1A5YM72 827 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 HNRNPDLO14979 420 aaKnown RBP12.12□□□□□ -0.47
APTX-209ENST00000460940 GCNT3O95395 438 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 GATMP50440 423 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 UBE2HP62256 183 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 FAM193AP78312 1265 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 CUL4BQ13620 913 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 EEF1DP3Q658K8 133 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 AGMOQ6ZNB7 445 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 ENGASEQ8NFI3 743 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 URGCPQ8TCY9 931 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 GPT2Q8TD30 523 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 HELQQ8TDG4 1101 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 CASD1Q96PB1 797 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 STRA6Q9BX79 667 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 BLZF1Q9H2G9 400 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 SEMA6BQ9H3T3 888 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 NXF3Q9H4D5 531 aaKnown RBP12.12□□□□□ -0.47
APTX-209ENST00000460940 GIT1Q9Y2X7 761 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 MRPL42Q9Y6G3 142 aaKnown RBP12.12□□□□□ -0.47
APTX-209ENST00000460940 CTIFO43310 598 aaKnown RBP12.12□□□□□ -0.47
APTX-209ENST00000460940 ARHGEF15O94989 841 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 LIG4P49917 911 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 EHHADHQ08426 723 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 TPRNQ4KMQ1 711 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 PAN2Q504Q3 1202 aaKnown RBP12.12□□□□□ -0.47
APTX-209ENST00000460940 NOMO2Q5JPE7 1267 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 FAM26FQ5R3K3 315 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 CDR2LQ86X02 465 aaPredicted RBP12.12□□□□□ -0.47
APTX-209ENST00000460940 GRAMD1CQ8IYS0 662 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 DEFB123Q8N688 67 aa12.12□□□□□ -0.47
APTX-209ENST00000460940 LPPQ93052 612 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms