RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ZNF888P0CJ79 500 aaPredicted RBP4.48□□□□□ -1.69
RFC4-211ENST00000460408 HNRNPLP14866 589 aaKnown RBP eCLIP4.48□□□□□ -1.69
RFC4-211ENST00000460408 VCAM1P19320 739 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 LPOP22079 712 aaPredicted RBP4.48□□□□□ -1.69
RFC4-211ENST00000460408 EDNRBP24530 442 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 AKAP5P24588 427 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 WASP42768 502 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 MCAMP43121 646 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 NRG3P56975 720 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 MEF2AQ02078 507 aaPredicted RBP4.48□□□□□ -1.69
RFC4-211ENST00000460408 MGAT5Q09328 741 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 ZNF568Q3ZCX4 644 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 RRP12Q5JTH9 1297 aaKnown RBP4.48□□□□□ -1.69
RFC4-211ENST00000460408 CCDC181Q5TID7 509 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 EPM2AIP1Q7L775 607 aaPredicted RBP4.48□□□□□ -1.69
RFC4-211ENST00000460408 POLNQ7Z5Q5 900 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 C1orf210Q8IVY1 113 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 THEMISQ8N1K5 641 aaPredicted RBP4.48□□□□□ -1.69
RFC4-211ENST00000460408 PIK3C3Q8NEB9 887 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 TTC8Q8TAM2 541 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 HOXB13Q92826 284 aaPredicted RBP4.48□□□□□ -1.69
RFC4-211ENST00000460408 CARD11Q9BXL7 1154 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 ANLNQ9NQW6 1124 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 ZBTB21Q9ULJ3 1066 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 NOB1Q9ULX3 412 aaKnown RBP4.48□□□□□ -1.69
RFC4-211ENST00000460408 OAZ3Q9UMX2 235 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 IPPQ9Y573 584 aa4.48□□□□□ -1.69
RFC4-211ENST00000460408 CTDP1Q9Y5B0 961 aaPredicted RBP4.48□□□□□ -1.69
RFC4-211ENST00000460408 C2orf78A6NCI8 922 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 IL33O95760 270 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 C1SP09871 688 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 CR2P20023 1033 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 XPAP23025 273 aaPredicted RBP4.47□□□□□ -1.69
RFC4-211ENST00000460408 CYP2C19P33261 490 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 MRE11P49959 708 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 KIF23Q02241 960 aaPredicted RBP4.47□□□□□ -1.69
RFC4-211ENST00000460408 DUSP8Q13202 625 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 ADAM15Q13444 863 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 TCIRG1Q13488 830 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 GTF2H3Q13889 308 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 MLC1Q15049 377 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 PCOLCEQ15113 449 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 MAN2A1Q16706 1144 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 HSP90AB2PQ58FF8 381 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 MUM1L1Q5H9M0 696 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 KLHDC10Q6PID8 442 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 LMBR1LQ6UX01 489 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 B3GNT9Q6UX72 402 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 C14orf80Q86SX3 495 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 CLEC14AQ86T13 490 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 WDR75Q8IWA0 830 aaKnown RBP4.47□□□□□ -1.69
RFC4-211ENST00000460408 PPM1NQ8N819 430 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 IL17DQ8TAD2 202 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 GFM2Q969S9 779 aaKnown RBP4.47□□□□□ -1.69
RFC4-211ENST00000460408 FAM89AQ96GI7 184 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 PAWRQ96IZ0 340 aaKnown RBP4.47□□□□□ -1.69
RFC4-211ENST00000460408 KIAA1683Q9H0B3 1180 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 GREM2Q9H772 168 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 DMRT3Q9NQL9 472 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 LIMCH1Q9UPQ0 1083 aa4.47□□□□□ -1.69
RFC4-211ENST00000460408 HTRA2O43464 458 aaPredicted RBP4.46□□□□□ -1.7
RFC4-211ENST00000460408 FSBPO95073 299 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 POU2F2P09086 479 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 CT47B1P0C2W7 299 aaPredicted RBP4.46□□□□□ -1.7
RFC4-211ENST00000460408 U2AF1L5P0DN76 240 aaPredicted RBP4.46□□□□□ -1.7
RFC4-211ENST00000460408 CTSSP25774 331 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 ACRV1P26436 265 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 FXR1P51114 621 aaKnown RBP eCLIP4.46□□□□□ -1.7
RFC4-211ENST00000460408 SLC16A1P53985 500 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 SESN2P58004 480 aaPredicted RBP4.46□□□□□ -1.7
RFC4-211ENST00000460408 ADAM8P78325 824 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 U2AF1Q01081 240 aaKnown RBP eCLIP4.46□□□□□ -1.7
RFC4-211ENST00000460408 HGFACQ04756 655 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 MGAT2Q10469 447 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 TBR1Q16650 682 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 RNF151Q2KHN1 245 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 MST1LQ2TV78 715 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 ATAT1Q5SQI0 421 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 ABHD15Q6UXT9 468 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 TAS1R1Q7RTX1 841 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 LDLRAD3Q86YD5 345 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 RTKN2Q8IZC4 609 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 PRR18Q8N4B5 295 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 MSL3Q8N5Y2 521 aaKnown RBP4.46□□□□□ -1.7
RFC4-211ENST00000460408 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.46□□□□□ -1.7
RFC4-211ENST00000460408 OR2I1PQ8NGU4 316 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 NRG4Q8WWG1 115 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 NEU4Q8WWR8 484 aaPredicted RBP4.46□□□□□ -1.7
RFC4-211ENST00000460408 GTPBP4Q9BZE4 634 aaKnown RBP4.46□□□□□ -1.7
RFC4-211ENST00000460408 OR10A2Q9H208 303 aa4.46□□□□□ -1.7
RFC4-211ENST00000460408 RBM12Q9NTZ6 932 aaKnown RBP4.46□□□□□ -1.7
RFC4-211ENST00000460408 MTSS1O43312 755 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 LTA4HP09960 611 aaKnown RBP4.45□□□□□ -1.7
RFC4-211ENST00000460408 MEOX1P50221 254 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 TBX4P57082 545 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 NFYCQ13952 458 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 SEPT2Q15019 361 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 UBE3CQ15386 1083 aa4.45□□□□□ -1.7
RFC4-211ENST00000460408 C3orf36Q3SXR2 165 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms