RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 U2AF2P26368 475 aaKnown RBP eCLIP25.2■■□□□ 1.623e-6■■■□□ 15.4
PTPN4-207ENST00000460162 GRIK3Q13003 919 aa25.2■■□□□ 1.62
PTPN4-207ENST00000460162 FBXL18Q96ME1 805 aa25.2■■□□□ 1.62
PTPN4-207ENST00000460162 FZD8Q9H461 694 aa25.2■■□□□ 1.62
PTPN4-207ENST00000460162 C2orf16Q68DN1 1984 aa25.19■■□□□ 1.62
PTPN4-207ENST00000460162 KLRC2P26717 231 aa25.19■■□□□ 1.62
PTPN4-207ENST00000460162 NAMPTP43490 491 aa25.19■■□□□ 1.62
PTPN4-207ENST00000460162 GLUD2P49448 558 aa25.19■■□□□ 1.62
PTPN4-207ENST00000460162 ATAT1Q5SQI0 421 aa25.19■■□□□ 1.62
PTPN4-207ENST00000460162 ZBTB33Q86T24 672 aa25.19■■□□□ 1.62
PTPN4-207ENST00000460162 CDR2LQ86X02 465 aaPredicted RBP25.19■■□□□ 1.62
PTPN4-207ENST00000460162 C12orf76Q8N812 135 aaPredicted RBP25.19■■□□□ 1.62
PTPN4-207ENST00000460162 GSTCDQ8NEC7 633 aa25.19■■□□□ 1.62
PTPN4-207ENST00000460162 BSNDQ8WZ55 320 aa25.19■■□□□ 1.62
PTPN4-207ENST00000460162 RPS6KC1Q96S38 1066 aa25.19■■□□□ 1.62
PTPN4-207ENST00000460162 MIOSQ9NXC5 875 aa25.19■■□□□ 1.62
PTPN4-207ENST00000460162 STK24Q9Y6E0 443 aa25.19■■□□□ 1.62
PTPN4-207ENST00000460162 SPDYE4A6NLX3 237 aa25.18■■□□□ 1.62
PTPN4-207ENST00000460162 C2CD4DB7Z1M9 353 aa25.18■■□□□ 1.62
PTPN4-207ENST00000460162 N4BP3O15049 544 aa25.18■■□□□ 1.62
PTPN4-207ENST00000460162 ADH1AP07327 375 aa25.18■■□□□ 1.62
PTPN4-207ENST00000460162 AKAP5P24588 427 aa25.18■■□□□ 1.62
PTPN4-207ENST00000460162 PPP2R5AQ15172 486 aa25.18■■□□□ 1.62
PTPN4-207ENST00000460162 MAPK6Q16659 721 aa25.18■■□□□ 1.62
PTPN4-207ENST00000460162 C4orf32Q8N8J7 132 aa25.18■■□□□ 1.62
PTPN4-207ENST00000460162 TDRD5Q8NAT2 981 aaKnown RBP25.18■■□□□ 1.62
PTPN4-207ENST00000460162 PBXIP1Q96AQ6 731 aa25.18■■□□□ 1.62
PTPN4-207ENST00000460162 RAB34Q9BZG1 259 aa25.18■■□□□ 1.62
PTPN4-207ENST00000460162 USTQ9Y2C2 406 aa25.18■■□□□ 1.62
PTPN4-207ENST00000460162 PIEZO1Q92508 2521 aa25.17■■□□□ 1.62
PTPN4-207ENST00000460162 WEE2P0C1S8 567 aa25.17■■□□□ 1.62
PTPN4-207ENST00000460162 CCT6AP40227 531 aaKnown RBP25.17■■□□□ 1.62
PTPN4-207ENST00000460162 NBR1Q14596 966 aa25.17■■□□□ 1.62
PTPN4-207ENST00000460162 RABEP1Q15276 862 aa25.17■■□□□ 1.62
PTPN4-207ENST00000460162 SUGP1Q8IWZ8 645 aaKnown RBP25.17■■□□□ 1.62
PTPN4-207ENST00000460162 DEPTORQ8TB45 409 aa25.17■■□□□ 1.62
PTPN4-207ENST00000460162 ASIC4Q96FT7 647 aa25.17■■□□□ 1.62
PTPN4-207ENST00000460162 COLEC11Q9BWP8 271 aa25.17■■□□□ 1.62
PTPN4-207ENST00000460162 CCDC113Q9H0I3 377 aa25.17■■□□□ 1.62
PTPN4-207ENST00000460162 PDZD7Q9H5P4 517 aa25.17■■□□□ 1.62
PTPN4-207ENST00000460162 DAXXQ9UER7 740 aaPredicted RBP25.17■■□□□ 1.62
PTPN4-207ENST00000460162 LRWD1Q9UFC0 647 aa25.17■■□□□ 1.62
PTPN4-207ENST00000460162 PARP2Q9UGN5 583 aa25.17■■□□□ 1.62
PTPN4-207ENST00000460162 KIF3AQ9Y496 699 aa25.17■■□□□ 1.62
PTPN4-207ENST00000460162 WDFY4Q6ZS81 3184 aa25.17■■□□□ 1.62
PTPN4-207ENST00000460162 ZDBF2Q9HCK1 2354 aa25.16■■□□□ 1.62
PTPN4-207ENST00000460162 C2CD2LO14523 706 aa25.16■■□□□ 1.62
PTPN4-207ENST00000460162 PRKCBP05771 671 aa25.16■■□□□ 1.62
PTPN4-207ENST00000460162 DSG1Q02413 1049 aa25.16■■□□□ 1.62
PTPN4-207ENST00000460162 PRPF4BQ13523 1007 aaKnown RBP25.16■■□□□ 1.62
PTPN4-207ENST00000460162 MTMR3Q13615 1198 aa25.16■■□□□ 1.62
PTPN4-207ENST00000460162 ELMSAN1Q6PJG2 1045 aa25.16■■□□□ 1.62
PTPN4-207ENST00000460162 TMC5Q6UXY8 1006 aa25.16■■□□□ 1.62
PTPN4-207ENST00000460162 C15orf39Q6ZRI6 1047 aa25.16■■□□□ 1.62
PTPN4-207ENST00000460162 GPR149Q86SP6 731 aa25.16■■□□□ 1.62
PTPN4-207ENST00000460162 GPR65Q8IYL9 337 aa25.16■■□□□ 1.62
PTPN4-207ENST00000460162 ZDHHC14Q8IZN3 488 aa25.16■■□□□ 1.62
PTPN4-207ENST00000460162 SORCS3Q9UPU3 1222 aa25.16■■□□□ 1.62
PTPN4-207ENST00000460162 LAD1O00515 517 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 TEX28O15482 410 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 PDIA5Q14554 519 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 TMEM132AQ24JP5 1023 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 KIAA0319Q5VV43 1072 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 KANK3Q6NY19 840 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 FUT10Q6P4F1 479 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 FBXL6Q8N531 539 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 IGSF22Q8N9C0 903 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 CMASQ8NFW8 434 aaPredicted RBP25.15■■□□□ 1.62
PTPN4-207ENST00000460162 KIFAP3Q92845 792 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 ADPGKQ9BRR6 497 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 BHMT2Q9H2M3 363 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 RXFP1Q9HBX9 757 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 KLK14Q9P0G3 267 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 DPP7Q9UHL4 492 aa25.15■■□□□ 1.62
PTPN4-207ENST00000460162 F8W810 466 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 ACKR2O00590 384 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 ST18O60284 1047 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 GLUD1P00367 558 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 TOB1P50616 345 aaPredicted RBP25.14■■□□□ 1.62
PTPN4-207ENST00000460162 EFNA5P52803 228 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 PTGDRQ13258 359 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 ECM1Q16610 540 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 CCDC149Q6ZUS6 474 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 TAS1R1Q7RTX1 841 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 UBALD2Q8IYN6 164 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 PLCD3Q8N3E9 789 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 KREMEN2Q8NCW0 462 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 SNX29Q8TEQ0 813 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 IFT74Q96LB3 600 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 MAN1C1Q9NR34 630 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.14■■□□□ 1.62
PTPN4-207ENST00000460162 CHST7Q9NS84 486 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 ADAM28Q9UKQ2 775 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 PCDHB6Q9Y5E3 794 aa25.14■■□□□ 1.62
PTPN4-207ENST00000460162 TTLL13PA6NNM8 815 aa25.13■■□□□ 1.61
PTPN4-207ENST00000460162 TUSC3Q13454 348 aa25.13■■□□□ 1.61
PTPN4-207ENST00000460162 DDX19AQ9NUU7 478 aaKnown RBP25.13■■□□□ 1.61
PTPN4-207ENST00000460162 KIAA1024Q9UPX6 916 aa25.13■■□□□ 1.61
PTPN4-207ENST00000460162 MTCL1Q9Y4B5 1905 aaKnown RBP25.12■■□□□ 1.61
PTPN4-207ENST00000460162 RECQL4O94761 1208 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 285.6 ms