RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 SLC39A2Q9NP94 309 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 LMBRD1Q9NUN5 540 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 ANKFY1Q9P2R3 1169 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 HES2Q9Y543 173 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 LCHNA4D1U4 455 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 MEIS3P2A8K0S8 358 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 HNRNPDLO14979 420 aaKnown RBP11.89□□□□□ -0.51
CCDC12-204ENST00000460035 CLDN3O15551 220 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 TOM1L1O75674 476 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 SMC2O95347 1197 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 CA3P07451 260 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 AKAP5P24588 427 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 OSTNP61366 133 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 DPYDQ12882 1025 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 PSMD2Q13200 908 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 DCAF4L1Q3SXM0 396 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 ZNF568Q3ZCX4 644 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 SPOUT1Q5T280 376 aaKnown RBP11.89□□□□□ -0.51
CCDC12-204ENST00000460035 L1TD1Q5T7N2 865 aaKnown RBP11.89□□□□□ -0.51
CCDC12-204ENST00000460035 GLB1LQ6UWU2 654 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 MPZL3Q6UWV2 235 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 MAP4K3Q8IVH8 894 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 THNSL1Q8IYQ7 743 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 FIBCD1Q8N539 461 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 SP7Q8TDD2 431 aaPredicted RBP11.89□□□□□ -0.51
CCDC12-204ENST00000460035 HELQQ8TDG4 1101 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 RSPH1Q8WYR4 309 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 ZNF689Q96CS4 500 aaPredicted RBP11.89□□□□□ -0.51
CCDC12-204ENST00000460035 TMEM117Q9H0C3 514 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 NXF3Q9H4D5 531 aaKnown RBP11.89□□□□□ -0.51
CCDC12-204ENST00000460035 PTPRHQ9HD43 1115 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 RNF19AQ9NV58 838 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 SNTG2Q9NY99 539 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 INPP5FQ9Y2H2 1132 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 GDAQ9Y2T3 454 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 ZMYM2Q9UBW7 1377 aa11.89□□□□□ -0.51
CCDC12-204ENST00000460035 ANKRD63C9JTQ0 380 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 TULP1O00294 542 aaPredicted RBP11.88□□□□□ -0.51
CCDC12-204ENST00000460035 ABLIM1O14639 778 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 OFD1O75665 1012 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 MCF2P10911 925 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 PROZP22891 400 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 KCNA1Q09470 495 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 CLLU1OSQ5K130 101 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 PPP2R2DQ66LE6 453 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 SLFN12LQ6IEE8 588 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 GPR153Q6NV75 609 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 AGMOQ6ZNB7 445 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 EPM2AIP1Q7L775 607 aaPredicted RBP11.88□□□□□ -0.51
CCDC12-204ENST00000460035 NELFCDQ8IXH7 590 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 GLIS3Q8NEA6 775 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 ERCC4Q92889 916 aaPredicted RBP11.88□□□□□ -0.51
CCDC12-204ENST00000460035 SMARCE1Q969G3 411 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 CASD1Q96PB1 797 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 GAD1Q99259 594 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 CCDC94Q9BW85 323 aaPredicted RBP11.88□□□□□ -0.51
CCDC12-204ENST00000460035 CDT1Q9H211 546 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 IKZF4Q9H2S9 585 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 TMEM206Q9H813 350 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 CERS4Q9HA82 394 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 RSAD1Q9HA92 442 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 UBN1Q9NPG3 1134 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 TYW1Q9NV66 732 aaKnown RBP11.88□□□□□ -0.51
CCDC12-204ENST00000460035 KLK14Q9P0G3 267 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 MTUS1Q9ULD2 1270 aa11.88□□□□□ -0.51
CCDC12-204ENST00000460035 UBE4BO95155 1302 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 PRRC2BQ5JSZ5 2229 aaKnown RBP11.87□□□□□ -0.51
CCDC12-204ENST00000460035 BRWD1Q9NSI6 2320 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 TMEM265A0A087WTH1 108 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 LINC01553A4QN01 128 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 TISP43B9A030 160 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 EIF3DO15371 548 aaKnown RBP eCLIP11.87□□□□□ -0.51
CCDC12-204ENST00000460035 FXR1P51114 621 aaKnown RBP eCLIP11.87□□□□□ -0.51
CCDC12-204ENST00000460035 YARSP54577 528 aaKnown RBP11.87□□□□□ -0.51
CCDC12-204ENST00000460035 TAP1Q03518 808 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 RNASELQ05823 741 aaKnown RBP11.87□□□□□ -0.51
CCDC12-204ENST00000460035 STK4Q13043 487 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 KCNB1Q14721 858 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 NOLC1Q14978 699 aaKnown RBP eCLIP11.87□□□□□ -0.51
CCDC12-204ENST00000460035 CAMK4Q16566 473 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 SEZ6Q53EL9 994 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 NOMO2Q5JPE7 1267 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 ZNF697Q5TEC3 545 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 CMTR2Q8IYT2 770 aaKnown RBP11.87□□□□□ -0.51
CCDC12-204ENST00000460035 ZNF507Q8TCN5 953 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 URGCPQ8TCY9 931 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 POMGNT1Q8WZA1 660 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 FAM161BQ96MY7 647 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 ACAP3Q96P50 834 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 FAM193BQ96PV7 902 aaPredicted RBP11.87□□□□□ -0.51
CCDC12-204ENST00000460035 MSTO1Q9BUK6 570 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 ZNF576Q9H609 170 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 GIT1Q9Y2X7 761 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 PCDHA5Q9Y5H7 936 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 SCN1AP35498 2009 aa11.87□□□□□ -0.51
CCDC12-204ENST00000460035 CHD9Q3L8U1 2897 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 ARL5CA6NH57 179 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 INPPL1O15357 1258 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 RHOBTB3O94955 611 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 ARHGEF15O94989 841 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms