RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 DDHD2O94830 711 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 PAPLNO95428 1278 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 PDCP20941 246 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 GJB2P29033 226 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 PLXNA3P51805 1871 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 PRPF4BQ13523 1007 aaKnown RBP11.05□□□□□ -0.64
HDLBP-228ENST00000459788 PTPN14Q15678 1187 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 CLUL1Q15846 466 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 BRAPQ7Z569 592 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 DEPTORQ8TB45 409 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 SNX29Q8TEQ0 813 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 SLC22A17Q8WUG5 538 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 KCNN1Q92952 543 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 DRC1Q96MC2 740 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 RIPOR3Q96MK2 946 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 GAD1Q99259 594 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 BHMT2Q9H2M3 363 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 TMEM134Q9H6X4 195 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.05□□□□□ -0.64
HDLBP-228ENST00000459788 MRPL17Q9NRX2 175 aaKnown RBP11.05□□□□□ -0.64
HDLBP-228ENST00000459788 DDX19AQ9NUU7 478 aaKnown RBP11.05□□□□□ -0.64
HDLBP-228ENST00000459788 KIAA1024Q9UPX6 916 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 SMC3Q9UQE7 1217 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 HCN4Q9Y3Q4 1203 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 NR2E1Q9Y466 385 aa11.05□□□□□ -0.64
HDLBP-228ENST00000459788 ZDBF2Q9HCK1 2354 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-228ENST00000459788 POMCP01189 267 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 PRKCBP05771 671 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 URODP06132 367 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 GUCY2CP25092 1073 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 BMP8AQ7Z5Y6 402 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 TMEM173Q86WV6 379 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-228ENST00000459788 RNF135Q8IUD6 432 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 GSTCDQ8NEC7 633 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 CMASQ8NFW8 434 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-228ENST00000459788 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.64
HDLBP-228ENST00000459788 CPB2Q96IY4 423 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 RPS6KC1Q96S38 1066 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 NTPCRQ9BSD7 190 aaKnown RBP11.04□□□□□ -0.64
HDLBP-228ENST00000459788 GBP3Q9H0R5 595 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 RXFP1Q9HBX9 757 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 C11orf16Q9NQ32 467 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 GPRC5CQ9NQ84 441 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 FNIP2Q9P278 1114 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 USTQ9Y2C2 406 aa11.04□□□□□ -0.64
HDLBP-228ENST00000459788 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-228ENST00000459788 VWA8A3KMH1 1905 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 H0YCG3 227 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 K7ERI5 159 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 B4GALT5O43286 388 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 B4GALT3O60512 393 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 CSPG5O95196 566 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 NPTXRO95502 500 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 ADH1AP07327 375 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 ABCD1P33897 745 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 MLH1P40692 756 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 GLUD2P49448 558 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 SCNN1GP51170 649 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 DSG1Q02413 1049 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 ELAVL2Q12926 359 aaKnown RBP11.03□□□□□ -0.64
HDLBP-228ENST00000459788 DMP1Q13316 513 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-228ENST00000459788 TUSC3Q13454 348 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 CUL4AQ13619 759 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 ECM1Q16610 540 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 USP41Q3LFD5 358 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 LONRF3Q496Y0 759 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 ATAT1Q5SQI0 421 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 KIAA0319Q5VV43 1072 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 MCTP1Q6DN14 999 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 KIAA1841Q6NSI8 718 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 PDXDC1Q6P996 788 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 C15orf39Q6ZRI6 1047 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 BCL7CQ8WUZ0 217 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-228ENST00000459788 SPIRE2Q8WWL2 714 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 BSNDQ8WZ55 320 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 EDAQ92838 391 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 KLHL5Q96PQ7 755 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 VN1R3Q9BXE9 311 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 RNF39Q9H2S5 420 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 NXF3Q9H4D5 531 aaKnown RBP11.03□□□□□ -0.64
HDLBP-228ENST00000459788 PDZD7Q9H5P4 517 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 SFXN1Q9H9B4 322 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 CHST7Q9NS84 486 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 MARCH5Q9NX47 278 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 TNFSF13BQ9Y275 285 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 DOCK8Q8NF50 2099 aa11.03□□□□□ -0.64
HDLBP-228ENST00000459788 MYH15Q9Y2K3 1946 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 BRD1O95696 1058 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 THP07101 528 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 OR1G1P47890 313 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 CLCN4P51793 760 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 AFF1P51825 1210 aaKnown RBP11.02□□□□□ -0.65
HDLBP-228ENST00000459788 NBR1Q14596 966 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 LARP1BQ659C4 914 aaKnown RBP11.02□□□□□ -0.65
HDLBP-228ENST00000459788 RINT1Q6NUQ1 792 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 C1orf186Q6ZWK4 172 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 MAEAQ7L5Y9 396 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 PLCD3Q8N3E9 789 aa11.02□□□□□ -0.65
HDLBP-228ENST00000459788 SYT2Q8N9I0 419 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms