RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 RASGRF2O14827 1237 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 RTN2O75298 545 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 UFL1O94874 794 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 NCALDP61601 193 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 PDCD2Q16342 344 aaPredicted RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 CBWD6Q4V339 395 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 CBWD3Q5JTY5 395 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 CBWD5Q5RIA9 395 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 TTC27Q6P3X3 843 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 CCDC137Q6PK04 289 aaKnown RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 ADAT2Q7Z6V5 191 aaKnown RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 PALB2Q86YC2 1186 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 GBP7Q8N8V2 638 aaPredicted RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 LMO3Q8TAP4 145 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 TBC1D16Q8TBP0 767 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 EPS8L3Q8TE67 593 aaKnown RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 DCAF4Q8WV16 495 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 CD101Q93033 1021 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 VTI1AQ96AJ9 217 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 AGPAT1Q99943 283 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 INTS2Q9H0H0 1204 aaKnown RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 TMX4Q9H1E5 349 aaPredicted RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 RANBP17Q9H2T7 1088 aaKnown RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 DDX4Q9NQI0 724 aaKnown RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 TMOD4Q9NZQ9 345 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 BAIAP2L1Q9UHR4 511 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 USP21Q9UK80 565 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 AGAP1Q9UPQ3 857 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 SUGT1Q9Y2Z0 365 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 NRXN2Q9P2S2 1712 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 FAM86B1E9PN63 330 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 O00370 1275 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 MSH4O15457 936 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 FOSP01100 380 aaPredicted RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 FAM86B2P0C5J1 330 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 RARAP10276 462 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 KRT13P13646 458 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 NQO1P15559 274 aaKnown RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 UBAP2Q5T6F2 1119 aaKnown RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 C1orf186Q6ZWK4 172 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 TRMT10CQ7L0Y3 403 aaKnown RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 EXOC3L1Q86VI1 746 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 SLC9A9Q8IVB4 645 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 KRT35Q92764 455 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 SLCO2A1Q92959 643 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 CCDC97Q96F63 343 aaPredicted RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 RSRC1Q96IZ7 334 aaKnown RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 FIZ1Q96SL8 496 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 SLX1AQ9BQ83 275 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 EIF2AK1Q9BQI3 630 aaKnown RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 WNT8AQ9H1J5 351 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 TAOK3Q9H2K8 898 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 BCAS3Q9H6U6 928 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 BATF3Q9NR55 127 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 HOMER3Q9NSC5 361 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 ABCF3Q9NUQ8 709 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 IRAK4Q9NWZ3 460 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 PLA2G2EQ9NZK7 142 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 SEL1LQ9UBV2 794 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 GGA1Q9UJY5 639 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 C15orf41Q9Y2V0 281 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 USP15Q9Y4E8 981 aaPredicted RBP9.13□□□□□ -0.95
VPS50-208ENST00000458707 EP400Q96L91 3159 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 TK2O00142 265 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 GNPATO15228 680 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 UBOX5O94941 541 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 GJB6O95452 261 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 VIMP08670 466 aaKnown RBP9.12□□□□□ -0.95
VPS50-208ENST00000458707 CYP3A4P08684 503 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 FGFR4P22455 802 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 POLD1P28340 1107 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 COILP38432 576 aaPredicted RBP9.12□□□□□ -0.95
VPS50-208ENST00000458707 MARCKSL1P49006 195 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 CLNS1AP54105 237 aaKnown RBP9.12□□□□□ -0.95
VPS50-208ENST00000458707 MYL7Q01449 175 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 BNIP1Q12981 228 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 PICALMQ13492 652 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 SIX1Q15475 284 aaPredicted RBP9.12□□□□□ -0.95
VPS50-208ENST00000458707 CRY2Q49AN0 593 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 ACCSLQ4AC99 568 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 SEL1L2Q5TEA6 688 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 NAIF1Q69YI7 327 aaPredicted RBP9.12□□□□□ -0.95
VPS50-208ENST00000458707 PHLDB3Q6NSJ2 640 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 AADACL2Q6P093 401 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 ADGRD1Q6QNK2 874 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 ZNF720Q7Z2F6 126 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 TBC1D1Q86TI0 1168 aaPredicted RBP9.12□□□□□ -0.95
VPS50-208ENST00000458707 DRAXINQ8NBI3 349 aaPredicted RBP9.12□□□□□ -0.95
VPS50-208ENST00000458707 TMEM174Q8WUU8 243 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 TCP11Q8WWU5 503 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 CCDC17Q96LX7 622 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 SERPINB12Q96P63 405 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 HSD17B14Q9BPX1 270 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 MOV10L1Q9BXT6 1211 aaKnown RBP9.12□□□□□ -0.95
VPS50-208ENST00000458707 MAF1Q9H063 256 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 TUFT1Q9NNX1 390 aa9.12□□□□□ -0.95
VPS50-208ENST00000458707 PASKQ96RG2 1323 aa9.11□□□□□ -0.95
VPS50-208ENST00000458707 MYH9P35579 1960 aaKnown RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 FOXN3O00409 490 aaPredicted RBP9.11□□□□□ -0.95
VPS50-208ENST00000458707 EML1O00423 815 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms