RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 ZC3H11AO75152 810 aaKnown RBP eCLIP17.72■□□□□ 0.43
CD28-203ENST00000458610 TOM1L1O75674 476 aa17.72■□□□□ 0.43
CD28-203ENST00000458610 MCF2P10911 925 aa17.72■□□□□ 0.43
CD28-203ENST00000458610 MLH1P40692 756 aa17.72■□□□□ 0.43
CD28-203ENST00000458610 YARSP54577 528 aaKnown RBP17.72■□□□□ 0.43
CD28-203ENST00000458610 AAK1Q2M2I8 961 aa17.72■□□□□ 0.43
CD28-203ENST00000458610 ADALQ6DHV7 355 aa17.72■□□□□ 0.43
CD28-203ENST00000458610 LEO1Q8WVC0 666 aaPredicted RBP17.72■□□□□ 0.43
CD28-203ENST00000458610 DHX58Q96C10 678 aa17.72■□□□□ 0.43
CD28-203ENST00000458610 BICD1Q96G01 975 aa17.72■□□□□ 0.43
CD28-203ENST00000458610 CCDC94Q9BW85 323 aaPredicted RBP17.72■□□□□ 0.43
CD28-203ENST00000458610 GBP3Q9H0R5 595 aa17.72■□□□□ 0.43
CD28-203ENST00000458610 NRDE2Q9H7Z3 1164 aa17.72■□□□□ 0.43
CD28-203ENST00000458610 FAN1Q9Y2M0 1017 aa17.72■□□□□ 0.43
CD28-203ENST00000458610 TTLL13PA6NNM8 815 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 K7ENM7 598 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 POMCP01189 267 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 GALTP07902 379 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 AKAP5P24588 427 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 ZNF568Q3ZCX4 644 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 RESP18Q5W5W9 173 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 EEF1DP3Q658K8 133 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 MPZL3Q6UWV2 235 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 CCDC65Q8IXS2 484 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 SLC39A11Q8N1S5 342 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 HLA-CQ95604 372 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 ST6GALNAC4Q9H4F1 302 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 PTPRHQ9HD43 1115 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 NGRNQ9NPE2 291 aaKnown RBP17.71■□□□□ 0.43
CD28-203ENST00000458610 TLR9Q9NR96 1032 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 TOPORSQ9NS56 1045 aaPredicted RBP17.71■□□□□ 0.43
CD28-203ENST00000458610 SNTG2Q9NY99 539 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 TBX20Q9UMR3 447 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 USP20Q9Y2K6 914 aa17.71■□□□□ 0.43
CD28-203ENST00000458610 FNDC1Q4ZHG4 1894 aaPredicted RBP17.7■□□□□ 0.42
CD28-203ENST00000458610 A0A087X0B3 334 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 FSD2A1L4K1 749 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 MYMKA6NI61 221 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 POLR2DO15514 142 aaKnown RBP17.7■□□□□ 0.42
CD28-203ENST00000458610 CLDN3O15551 220 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 IDEP14735 1019 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 CMA1P23946 247 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 MATR3P43243 847 aaKnown RBP eCLIP17.7■□□□□ 0.42
CD28-203ENST00000458610 LIG4P49917 911 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 GTF2BQ00403 316 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 GRIK3Q13003 919 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 ALCAMQ13740 583 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 KYAT1Q16773 422 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 TAS1R3Q7RTX0 852 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.7■□□□□ 0.42
CD28-203ENST00000458610 ATXN2LQ8WWM7 1075 aaKnown RBP17.7■□□□□ 0.42
CD28-203ENST00000458610 HVCN1Q96D96 273 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 COLEC11Q9BWP8 271 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 KBTBD4Q9NVX7 518 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 THEGQ9P2T0 379 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 HCSTQ9UBK5 93 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 USP25Q9UHP3 1055 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 KCNH3Q9ULD8 1083 aa17.7■□□□□ 0.42
CD28-203ENST00000458610 THP07101 528 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 ANP32AP39687 249 aaKnown RBP17.69■□□□□ 0.42
CD28-203ENST00000458610 GRM5P41594 1212 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 SCNN1GP51170 649 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 E2F4Q16254 413 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 HERC4Q5GLZ8 1057 aaPredicted RBP17.69■□□□□ 0.42
CD28-203ENST00000458610 STXBP4Q6ZWJ1 553 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 ZNF720Q7Z2F6 126 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 ZBTB33Q86T24 672 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 DDX53Q86TM3 631 aaKnown RBP17.69■□□□□ 0.42
CD28-203ENST00000458610 ZNF280BQ86YH2 543 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 CEP57L1Q8IYX8 460 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 DNAJC19Q96DA6 116 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 IGSF21Q96ID5 467 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 ZFP42Q96MM3 310 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 ACAP3Q96P50 834 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 CDT1Q9H211 546 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 MRPL44Q9H9J2 332 aaKnown RBP17.69■□□□□ 0.42
CD28-203ENST00000458610 PANK4Q9NVE7 773 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 KLK14Q9P0G3 267 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 EXOC7Q9UPT5 735 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 GDAQ9Y2T3 454 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 PCDHB13Q9Y5F0 798 aa17.69■□□□□ 0.42
CD28-203ENST00000458610 NT5C1B-RDH14C9J2C7 533 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 RECQL4O94761 1208 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 DDHD2O94830 711 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 EDN1P05305 212 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 PROZP22891 400 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 OR1G1P47890 313 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 SLC11A1P49279 550 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 TCEAL5Q5H9L2 206 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 SLFN12LQ6IEE8 588 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 TMC7Q7Z402 723 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 SFR1Q86XK3 245 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 COLGALT2Q8IYK4 626 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 ENTPD7Q9NQZ7 604 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 OLFML3Q9NRN5 406 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 SZT2Q5T011 3432 aa17.68■□□□□ 0.42
CD28-203ENST00000458610 NLRC5Q86WI3 1866 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 NRP1O14786 923 aa17.67■□□□□ 0.42
CD28-203ENST00000458610 HNRNPDLO14979 420 aaKnown RBP17.67■□□□□ 0.42
CD28-203ENST00000458610 PIGRP01833 764 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms