RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 PHF24Q9UPV7 400 aa9.76□□□□□ -0.85
VPS50-207ENST00000458530 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.75□□□□□ -0.85
VPS50-207ENST00000458530 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.75□□□□□ -0.85
VPS50-207ENST00000458530 A0A1W2PQJ5 194 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 GTPBP10A4D1E9 387 aaKnown RBP9.75□□□□□ -0.85
VPS50-207ENST00000458530 RRN3P2A6NIE6 340 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 KBTBD13C9JR72 458 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 BHMG1C9JSJ3 638 aaPredicted RBP9.75□□□□□ -0.85
VPS50-207ENST00000458530 HNRNPDLO14979 420 aaKnown RBP9.75□□□□□ -0.85
VPS50-207ENST00000458530 ARHGAP6O43182 974 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 TGFB1I1O43294 461 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 KPNA6O60684 536 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 MFAP3LO75121 409 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 AFPP02771 609 aaKnown RBP9.75□□□□□ -0.85
VPS50-207ENST00000458530 AKR1A1P14550 325 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 SMPD1P17405 629 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 GARTP22102 1010 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 MARK3P27448 753 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 HOXD13P35453 343 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 ARL2P36404 184 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 LIG4P49917 911 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 CYP2J2P51589 502 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 TLE2Q04725 743 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 ENPEPQ07075 957 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 CETN1Q12798 172 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 SYCP1Q15431 976 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 TCERG1LQ5VWI1 586 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 SLFN12LQ6IEE8 588 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 INTS8Q75QN2 995 aaKnown RBP9.75□□□□□ -0.85
VPS50-207ENST00000458530 TLK2Q86UE8 772 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 TRIM50Q86XT4 487 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 FMNL3Q8IVF7 1028 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 XXYLT1Q8NBI6 393 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 NEK11Q8NG66 645 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 RNPC3Q96LT9 517 aaKnown RBP9.75□□□□□ -0.85
VPS50-207ENST00000458530 BAG1Q99933 345 aaPredicted RBP9.75□□□□□ -0.85
VPS50-207ENST00000458530 SLC4A5Q9BY07 1137 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 KCNF1Q9H3M0 494 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 ZNF576Q9H609 170 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 KIAA1586Q9HCI6 787 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 POLD4Q9HCU8 107 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 DMAC2Q9NW81 257 aa9.75□□□□□ -0.85
VPS50-207ENST00000458530 LUC7L2Q9Y383 392 aaKnown RBP9.75□□□□□ -0.85
VPS50-207ENST00000458530 CHD7Q9P2D1 2997 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 IGKV6-21A0A0C4DH24 114 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 H3BRB1 525 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 K7ERI5 159 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 CLIC2O15247 247 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 LDHAP00338 332 aaKnown RBP9.74□□□□□ -0.85
VPS50-207ENST00000458530 GYPCP04921 128 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 GLRA2P23416 452 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 CNGA1P29973 690 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 ZBED6P86452 979 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 CCZ1BP86790 482 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 CCZ1P86791 482 aaPredicted RBP9.74□□□□□ -0.85
VPS50-207ENST00000458530 CDC42EP1Q00587 391 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 RBL2Q08999 1139 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 DCAF17Q5H9S7 520 aaPredicted RBP9.74□□□□□ -0.85
VPS50-207ENST00000458530 C6orf132Q5T0Z8 1188 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 ANKRD33Q7Z3H0 272 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 KIAA1524Q8TCG1 905 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 ADAMTS19Q8TE59 1207 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 BSNDQ8WZ55 320 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 TMEM143Q96AN5 459 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 FAM122AQ96E09 287 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 EEF2KMTQ96G04 330 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 ZNF830Q96NB3 372 aaPredicted RBP9.74□□□□□ -0.85
VPS50-207ENST00000458530 TOX2Q96NM4 488 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 CEP89Q96ST8 783 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 MAP7D2Q96T17 732 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 TUT1Q9H6E5 874 aaKnown RBP9.74□□□□□ -0.85
VPS50-207ENST00000458530 SPC25Q9HBM1 224 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 PRDM5Q9NQX1 630 aaPredicted RBP9.74□□□□□ -0.85
VPS50-207ENST00000458530 HSPBP1Q9NZL4 362 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 CAPN11Q9UMQ6 739 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 TELO2Q9Y4R8 837 aa9.74□□□□□ -0.85
VPS50-207ENST00000458530 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.73□□□□□ -0.85
VPS50-207ENST00000458530 GOLGA6L9A6NEM1 432 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 GRXCR2A6NFK2 248 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 A6NJR5 290 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 P4HA2O15460 535 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 ZSCAN12O43309 604 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 ZEB2O60315 1214 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 AKAP3O75969 853 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 PIGRP01833 764 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 CLTBP09497 229 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 ZNF286BP0CG31 522 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 ZNF865P0CJ78 1059 aaPredicted RBP9.73□□□□□ -0.85
VPS50-207ENST00000458530 RFX1P22670 979 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 CASP14P31944 242 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 KRT9P35527 623 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 PHKA2P46019 1235 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 POU5F1BQ06416 359 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 KCNA1Q09470 495 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 KCNH2Q12809 1159 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 LRMPQ12912 555 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 BFSP1Q12934 665 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 PPFIA1Q13136 1202 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 CAPSQ13938 189 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 MAPK6Q16659 721 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms