RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 NASPP49321 788 aaPredicted RBP20.55■□□□□ 0.88
USP39-209ENST00000458268 OSTNP61366 133 aa20.55■□□□□ 0.88
USP39-209ENST00000458268 UBE3AQ05086 875 aa20.55■□□□□ 0.88
USP39-209ENST00000458268 STRN3Q13033 797 aa20.55■□□□□ 0.88
USP39-209ENST00000458268 ZNF568Q3ZCX4 644 aa20.55■□□□□ 0.88
USP39-209ENST00000458268 TPRNQ4KMQ1 711 aa20.55■□□□□ 0.88
USP39-209ENST00000458268 ARSHQ5FYA8 562 aa20.55■□□□□ 0.88
USP39-209ENST00000458268 TMEM173Q86WV6 379 aaPredicted RBP20.55■□□□□ 0.88
USP39-209ENST00000458268 KCTD17Q8N5Z5 321 aa20.55■□□□□ 0.88
USP39-209ENST00000458268 MYCT1Q8N699 235 aa20.55■□□□□ 0.88
USP39-209ENST00000458268 TCHPQ9BT92 498 aa20.55■□□□□ 0.88
USP39-209ENST00000458268 TARS2Q9BW92 718 aaKnown RBP20.55■□□□□ 0.88
USP39-209ENST00000458268 TLE6Q9H808 572 aa20.55■□□□□ 0.88
USP39-209ENST00000458268 KANSL3Q9P2N6 904 aa20.55■□□□□ 0.88
USP39-209ENST00000458268 K7ENM7 598 aa20.54■□□□□ 0.88
USP39-209ENST00000458268 GALTP07902 379 aa20.54■□□□□ 0.88
USP39-209ENST00000458268 STAT6P42226 847 aa20.54■□□□□ 0.88
USP39-209ENST00000458268 DYMQ7RTS9 669 aa20.54■□□□□ 0.88
USP39-209ENST00000458268 LINC00301Q8NCQ3 95 aa20.54■□□□□ 0.88
USP39-209ENST00000458268 BCL7CQ8WUZ0 217 aaPredicted RBP20.54■□□□□ 0.88
USP39-209ENST00000458268 BICD1Q96G01 975 aa20.54■□□□□ 0.88
USP39-209ENST00000458268 COL25A1Q9BXS0 654 aaPredicted RBP20.54■□□□□ 0.88
USP39-209ENST00000458268 MRPL4Q9BYD3 311 aaKnown RBP20.54■□□□□ 0.88
USP39-209ENST00000458268 MIOSQ9NXC5 875 aa20.54■□□□□ 0.88
USP39-209ENST00000458268 KCND2Q9NZV8 630 aa20.54■□□□□ 0.88
USP39-209ENST00000458268 LARSQ9P2J5 1176 aaKnown RBP20.54■□□□□ 0.88
USP39-209ENST00000458268 ANKFY1Q9P2R3 1169 aa20.54■□□□□ 0.88
USP39-209ENST00000458268 FAN1Q9Y2M0 1017 aa20.54■□□□□ 0.88
USP39-209ENST00000458268 GIT1Q9Y2X7 761 aa20.54■□□□□ 0.88
USP39-209ENST00000458268 RECQL4O94761 1208 aa20.53■□□□□ 0.88
USP39-209ENST00000458268 NDUFV1P49821 464 aa20.53■□□□□ 0.88
USP39-209ENST00000458268 PLCB3Q01970 1234 aa20.53■□□□□ 0.88
USP39-209ENST00000458268 BECN1Q14457 450 aa20.53■□□□□ 0.88
USP39-209ENST00000458268 DCAF4L1Q3SXM0 396 aa20.53■□□□□ 0.88
USP39-209ENST00000458268 LLGL2Q6P1M3 1020 aa20.53■□□□□ 0.88
USP39-209ENST00000458268 TAS1R3Q7RTX0 852 aa20.53■□□□□ 0.88
USP39-209ENST00000458268 APBB1IPQ7Z5R6 666 aaPredicted RBP20.53■□□□□ 0.88
USP39-209ENST00000458268 TMEM87AQ8NBN3 555 aa20.53■□□□□ 0.88
USP39-209ENST00000458268 AUTS2Q8WXX7 1259 aa20.53■□□□□ 0.88
USP39-209ENST00000458268 RABGGTAQ92696 567 aa20.53■□□□□ 0.88
USP39-209ENST00000458268 C17orf75Q9HAS0 396 aa20.53■□□□□ 0.88
USP39-209ENST00000458268 ARHGAP28Q9P2N2 729 aa20.53■□□□□ 0.88
USP39-209ENST00000458268 RBM19Q9Y4C8 960 aaKnown RBP20.53■□□□□ 0.88
USP39-209ENST00000458268 TRIP11Q15643 1979 aa20.52■□□□□ 0.88
USP39-209ENST00000458268 UNC80Q8N2C7 3258 aa20.52■□□□□ 0.88
USP39-209ENST00000458268 DNM1Q05193 864 aaKnown RBP20.52■□□□□ 0.88
USP39-209ENST00000458268 VPS52Q8N1B4 723 aa20.52■□□□□ 0.88
USP39-209ENST00000458268 RSPH1Q8WYR4 309 aa20.52■□□□□ 0.88
USP39-209ENST00000458268 PABPC5Q96DU9 382 aaKnown RBP20.52■□□□□ 0.88
USP39-209ENST00000458268 IGSF21Q96ID5 467 aa20.52■□□□□ 0.88
USP39-209ENST00000458268 TMEM134Q9H6X4 195 aa20.52■□□□□ 0.88
USP39-209ENST00000458268 CACNG4Q9UBN1 327 aa20.52■□□□□ 0.88
USP39-209ENST00000458268 STK17AQ9UEE5 414 aa20.52■□□□□ 0.88
USP39-209ENST00000458268 ODF2LQ9ULJ1 636 aa20.52■□□□□ 0.88
USP39-209ENST00000458268 HIDE1A8MVS5 230 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 NRP1O14786 923 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 NR1I2O75469 434 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 ALDH2P05091 517 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 PDIA4P13667 645 aaKnown RBP20.51■□□□□ 0.87
USP39-209ENST00000458268 DDIT3P35638 169 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 ME1P48163 572 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 GIT2Q14161 759 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 GLRA4Q5JXX5 417 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 CCDC73Q6ZRK6 1079 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 SV2BQ7L1I2 683 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 CEP120Q8N960 986 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 ADAMTS19Q8TE59 1207 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 SPIRE2Q8WWL2 714 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 CHAMP1Q96JM3 812 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 NECAB3Q96P71 396 aaPredicted RBP20.51■□□□□ 0.87
USP39-209ENST00000458268 ACO2Q99798 780 aaKnown RBP20.51■□□□□ 0.87
USP39-209ENST00000458268 CDT1Q9H211 546 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 PARVGQ9HBI0 331 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 LZTS1Q9Y250 596 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 TNFSF13BQ9Y275 285 aa20.51■□□□□ 0.87
USP39-209ENST00000458268 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.5■□□□□ 0.87
USP39-209ENST00000458268 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.5■□□□□ 0.87
USP39-209ENST00000458268 YEATS4O95619 227 aa20.5■□□□□ 0.87
USP39-209ENST00000458268 RBM10P98175 930 aaKnown RBP20.5■□□□□ 0.87
USP39-209ENST00000458268 DLX2Q07687 328 aaPredicted RBP20.5■□□□□ 0.87
USP39-209ENST00000458268 GRIK3Q13003 919 aa20.5■□□□□ 0.87
USP39-209ENST00000458268 SMC1AQ14683 1233 aaKnown RBP20.5■□□□□ 0.87
USP39-209ENST00000458268 BMS1Q14692 1282 aaKnown RBP20.5■□□□□ 0.87
USP39-209ENST00000458268 HAUS6Q7Z4H7 955 aa20.5■□□□□ 0.87
USP39-209ENST00000458268 TMEM161BQ8NDZ6 487 aa20.5■□□□□ 0.87
USP39-209ENST00000458268 STAMQ92783 540 aa20.5■□□□□ 0.87
USP39-209ENST00000458268 ZBTB45Q96K62 511 aaPredicted RBP20.5■□□□□ 0.87
USP39-209ENST00000458268 TMEM175Q9BSA9 504 aa20.5■□□□□ 0.87
USP39-209ENST00000458268 CCDC94Q9BW85 323 aaPredicted RBP20.5■□□□□ 0.87
USP39-209ENST00000458268 CXCL16Q9H2A7 254 aa20.5■□□□□ 0.87
USP39-209ENST00000458268 A0A087X0B3 334 aa20.49■□□□□ 0.87
USP39-209ENST00000458268 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.49■□□□□ 0.87
USP39-209ENST00000458268 CASTOR2A6NHX0 329 aa20.49■□□□□ 0.87
USP39-209ENST00000458268 F8W810 466 aa20.49■□□□□ 0.87
USP39-209ENST00000458268 TULP1O00294 542 aaPredicted RBP20.49■□□□□ 0.87
USP39-209ENST00000458268 C2CD2LO14523 706 aa20.49■□□□□ 0.87
USP39-209ENST00000458268 FSCN2O14926 492 aa20.49■□□□□ 0.87
USP39-209ENST00000458268 TRAK2O60296 914 aa20.49■□□□□ 0.87
USP39-209ENST00000458268 CUTAO60888 179 aa20.49■□□□□ 0.87
USP39-209ENST00000458268 PPP6R2O75170 966 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms