RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 AKT3Q9Y243 479 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 PPME1Q9Y570 386 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 ITIH6Q6UXX5 1313 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 CNTNAP2Q9UHC6 1331 aa9.54□□□□□ -0.88
RIF1-208ENST00000457745 A0A1W2PQC6 194 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 K7ERI5 159 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 PES1O00541 588 aaKnown RBP9.53□□□□□ -0.88
RIF1-208ENST00000457745 MAGEB2O15479 319 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 TSPAN1O60635 241 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 HSPA8P11142 646 aaKnown RBP9.53□□□□□ -0.88
RIF1-208ENST00000457745 GRK4P32298 578 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 SMTNP53814 917 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 CYP24A1Q07973 514 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 BFSP1Q12934 665 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 TRIM71Q2Q1W2 868 aaKnown RBP9.53□□□□□ -0.88
RIF1-208ENST00000457745 GPR153Q6NV75 609 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 WDR59Q6PJI9 974 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 HS2ST1Q7LGA3 356 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 FAM114A1Q8IWE2 563 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 XXYLT1Q8NBI6 393 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 LMO3Q8TAP4 145 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 TMEM174Q8WUU8 243 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 TCP11Q8WWU5 503 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 KAT5Q92993 513 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 MFSD14AQ96MC6 490 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 FAM213AQ9BRX8 229 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 MKNK1Q9BUB5 465 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.53□□□□□ -0.88
RIF1-208ENST00000457745 CDT1Q9H211 546 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 TMX1Q9H3N1 280 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 FAM207AQ9NSI2 230 aaPredicted RBP9.53□□□□□ -0.88
RIF1-208ENST00000457745 TRMT13Q9NUP7 481 aaKnown RBP9.53□□□□□ -0.88
RIF1-208ENST00000457745 RNF19AQ9NV58 838 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 ARMCX3Q9UH62 379 aaPredicted RBP9.53□□□□□ -0.88
RIF1-208ENST00000457745 GTF2IRD1Q9UHL9 959 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 PTPN22Q9Y2R2 807 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 PCDHGA4Q9Y5G9 962 aa9.53□□□□□ -0.88
RIF1-208ENST00000457745 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.53□□□□□ -0.88
RIF1-208ENST00000457745 SMIM35A0A1B0GVV1 85 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 C17orf102A2RUQ5 167 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 INO80B-WBP1J3KQ70 363 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 ACKR2O00590 384 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 KIF20AO95235 890 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 EPB41P11171 864 aaKnown RBP9.52□□□□□ -0.89
RIF1-208ENST00000457745 ARF4P18085 180 aaPredicted RBP9.52□□□□□ -0.89
RIF1-208ENST00000457745 GARTP22102 1010 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 FECHP22830 423 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 PON1P27169 355 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 HOXA11P31270 313 aaPredicted RBP9.52□□□□□ -0.89
RIF1-208ENST00000457745 PSMC2P35998 433 aaKnown RBP9.52□□□□□ -0.89
RIF1-208ENST00000457745 GCLMP48507 274 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 FMO5P49326 533 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 LIG4P49917 911 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 DNM2P50570 870 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 ACLYP53396 1101 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 MGAT3Q09327 533 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 PPP2R5AQ15172 486 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 SNRNP35Q16560 246 aaKnown RBP9.52□□□□□ -0.89
RIF1-208ENST00000457745 BRDTQ58F21 947 aaPredicted RBP9.52□□□□□ -0.89
RIF1-208ENST00000457745 TCERG1LQ5VWI1 586 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 TRAF7Q6Q0C0 670 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 RAD9BQ6WBX8 426 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 STXBP4Q6ZWJ1 553 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 ARHGEF19Q8IW93 802 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 OR5B17Q8NGF7 314 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 POMGNT1Q8WZA1 660 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 ANP32BQ92688 251 aaKnown RBP9.52□□□□□ -0.89
RIF1-208ENST00000457745 KHSRPQ92945 711 aaKnown RBP eCLIP9.52□□□□□ -0.89
RIF1-208ENST00000457745 BICD1Q96G01 975 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 CHP1Q99653 195 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 INO80BQ9C086 356 aaPredicted RBP9.52□□□□□ -0.89
RIF1-208ENST00000457745 TMEM117Q9H0C3 514 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 PDE11AQ9HCR9 933 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 GINS2Q9Y248 185 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 ZKSCAN5Q9Y2L8 839 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 FHOD1Q9Y613 1164 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 NRCAMQ92823 1304 aa9.52□□□□□ -0.89
RIF1-208ENST00000457745 PDCD11Q14690 1871 aaKnown RBP9.51□□□□□ -0.89
RIF1-208ENST00000457745 RRN3P2A6NIE6 340 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 SOWAHDA6NJG2 315 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 GAS2O43903 313 aaKnown RBP9.51□□□□□ -0.89
RIF1-208ENST00000457745 VNN1O95497 513 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 CALCAP01258 141 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 CHRNA1P02708 482 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 AFPP02771 609 aaKnown RBP9.51□□□□□ -0.89
RIF1-208ENST00000457745 PLEKP08567 350 aaPredicted RBP9.51□□□□□ -0.89
RIF1-208ENST00000457745 CTSHP09668 335 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 RPL13P26373 211 aaKnown RBP9.51□□□□□ -0.89
RIF1-208ENST00000457745 HOXD10P28358 340 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 VAMP7P51809 220 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 OSTNP61366 133 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 MYBPC2Q14324 1141 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 MXD4Q14582 209 aaPredicted RBP9.51□□□□□ -0.89
RIF1-208ENST00000457745 SNX17Q15036 470 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 FILIP1LQ4L180 1135 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 EPC2Q52LR7 807 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 UBXN11Q5T124 520 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 ATF7IP2Q5U623 682 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 IQCEQ6IPM2 695 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 C15orf39Q6ZRI6 1047 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms