RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 SH2D4AQ9H788 454 aa7.33□□□□□ -1.24
CUBNP3-201ENST00000457461 C12orf10Q9HB07 376 aa7.33□□□□□ -1.24
CUBNP3-201ENST00000457461 KCNMB3Q9NPA1 279 aa7.33□□□□□ -1.24
CUBNP3-201ENST00000457461 INIPQ9NRY2 104 aa7.33□□□□□ -1.24
CUBNP3-201ENST00000457461 GGA3Q9NZ52 723 aa7.33□□□□□ -1.24
CUBNP3-201ENST00000457461 KLHL42Q9P2K6 505 aa7.33□□□□□ -1.24
CUBNP3-201ENST00000457461 PPP1R9AQ9ULJ8 1098 aa7.33□□□□□ -1.24
CUBNP3-201ENST00000457461 TRAF3IP3Q9Y228 551 aa7.33□□□□□ -1.24
CUBNP3-201ENST00000457461 MRPL11Q9Y3B7 192 aaKnown RBP7.33□□□□□ -1.24
CUBNP3-201ENST00000457461 L3MBTL1Q9Y468 752 aa7.33□□□□□ -1.24
CUBNP3-201ENST00000457461 SNX9Q9Y5X1 595 aa7.33□□□□□ -1.24
CUBNP3-201ENST00000457461 LOC285556D6RIA3 1793 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 ARHGAP6O43182 974 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 NDUFB5O43674 189 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 CBFA2T3O75081 653 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 TACC1O75410 805 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 FBXO21O94952 628 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 STAMBPO95630 424 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 BMP15O95972 392 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 BMP3P12645 472 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 HOXB1P14653 301 aaPredicted RBP7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 BTF3P20290 206 aaKnown RBP7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 PTPREP23469 700 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 SP100P23497 879 aaPredicted RBP7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 CMA1P23946 247 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 GNA11P29992 359 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 TIE1P35590 1138 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 CLK2P49760 499 aaKnown RBP7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 KIF11P52732 1056 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 NAPAP54920 295 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 B2MP61769 119 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 TRAP1Q12931 704 aaKnown RBP7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 IRF5Q13568 498 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 MTMR3Q13615 1198 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 ANO6Q4KMQ2 910 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 SPECC1Q5M775 1068 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 ANKRD20A2Q5SQ80 823 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 NOL9Q5SY16 702 aaKnown RBP7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 FKBP15Q5T1M5 1219 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 ANKRD20A1Q5TYW2 823 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 ANKRD20A3Q5VUR7 823 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 ANO7Q6IWH7 933 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 ARHGEF18Q6ZSZ5 1173 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 CROCCP3Q8IVE0 287 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 RBM46Q8TBY0 533 aaKnown RBP7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 ZNF473Q8WTR7 871 aaKnown RBP7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 ZFPM2Q8WW38 1151 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 CASP10Q92851 521 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 KIFC2Q96AC6 838 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 UROC1Q96N76 676 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 PRPF18Q99633 342 aaKnown RBP7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 ZNF341Q9BYN7 854 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 GBA3Q9H227 469 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 PLEKHA4Q9H4M7 779 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 PCDHA6Q9UN73 950 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 RPL26L1Q9UNX3 145 aaKnown RBP7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 HPSEQ9Y251 543 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 PCDHB6Q9Y5E3 794 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 PCDHA8Q9Y5H6 950 aa7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 COL11A1P12107 1806 aaPredicted RBP7.32□□□□□ -1.24
CUBNP3-201ENST00000457461 TRIM75PA6NK02 468 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 USP17L10C9JJH3 530 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 ASAP2O43150 1006 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 GRIN3BO60391 1043 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 NR1I2O75469 434 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 B3GALNT1O75752 331 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 ZNF202O95125 648 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 CYP2C9P11712 490 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 COL6A1P12109 1028 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 M6PRP20645 277 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 LMOD1P29536 600 aaPredicted RBP7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 WEE1P30291 646 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 GSTT1P30711 240 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 SLC16A2P36021 539 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 ME1P48163 572 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 USP46P62068 366 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 E2F2Q14209 437 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 KCTD2Q14681 263 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 QRICH1Q2TAL8 776 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 ARL13BQ3SXY8 428 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 GLE1Q53GS7 698 aaKnown RBP7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 CFAP58Q5T655 872 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 RNF187Q5TA31 235 aaPredicted RBP7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 SYDE2Q5VT97 1194 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 SPATA1Q5VX52 437 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 TUBA3EQ6PEY2 450 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 KRT25Q7Z3Z0 450 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 MCF2L2Q86YR7 1114 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 FMR1NBQ8N0W7 255 aaPredicted RBP7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 SVIPQ8NHG7 77 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 MRPS27Q92552 414 aaKnown RBP7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 LPAR1Q92633 364 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 LENG1Q96BZ8 264 aaPredicted RBP7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 CCDC42Q96M95 316 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 WDR18Q9BV38 432 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 GLIS2Q9BZE0 524 aaPredicted RBP7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 KIAA1683Q9H0B3 1180 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 CLSTN2Q9H4D0 955 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 EPB41L1Q9H4G0 881 aa7.31□□□□□ -1.24
CUBNP3-201ENST00000457461 C6orf50Q9HD87 102 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms