RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 POP1Q99575 1024 aaKnown RBP18■□□□□ 0.47
CCDC43-202ENST00000457422 POLR3FQ9H1D9 316 aaPredicted RBP18■□□□□ 0.47
CCDC43-202ENST00000457422 SLITRK6Q9H5Y7 841 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 COG5Q9UP83 839 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 ZNFX1Q9P2E3 1918 aaKnown RBP17.99■□□□□ 0.47
CCDC43-202ENST00000457422 USP2O75604 605 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-202ENST00000457422 FTLP02792 175 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-202ENST00000457422 CHRNB2P17787 502 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 SCP2P22307 547 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 SP2Q02086 613 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 TAS1R3Q7RTX0 852 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 PPM1KQ8N3J5 372 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 SNCAIPQ9Y6H5 919 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 UTRNP46939 3433 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 KRIT1O00522 736 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 HNRNPDLO14979 420 aaKnown RBP17.99■□□□□ 0.47
CCDC43-202ENST00000457422 SART1O43290 800 aaKnown RBP17.99■□□□□ 0.47
CCDC43-202ENST00000457422 MTA2O94776 668 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 SGPL1O95470 568 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 GPC5P78333 572 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 CUL1Q13616 776 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 MTERF2Q49AM1 385 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 NOP9Q86U38 636 aaKnown RBP17.99■□□□□ 0.47
CCDC43-202ENST00000457422 AP1M1Q9BXS5 423 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 TAF1DQ9H5J8 278 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-202ENST00000457422 RAB20Q9NX57 234 aa17.99■□□□□ 0.47
CCDC43-202ENST00000457422 MAFBQ9Y5Q3 323 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-202ENST00000457422 OPA1O60313 960 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 PEX10O60683 326 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 HSF2BPO75031 334 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 CNTN2Q02246 1040 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 FSTL1Q12841 308 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 VGLL4Q14135 290 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 CLUL1Q15846 466 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 TREML2Q5T2D2 321 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 DLK2Q6UY11 383 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 LBX2Q6XYB7 198 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 GOLGA6L1Q8N7Z2 621 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 TAS1R2Q8TE23 839 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 ZNF526Q8TF50 670 aaPredicted RBP17.98■□□□□ 0.47
CCDC43-202ENST00000457422 IFT81Q8WYA0 676 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 NT5C1BQ96P26 610 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 PCDHB18PQ96TA0 734 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 OTOFQ9HC10 1997 aa17.98■□□□□ 0.47
CCDC43-202ENST00000457422 SYNGAP1Q96PV0 1343 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 GOLGA8KD6RF30 607 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 ZC3H11AO75152 810 aaKnown RBP eCLIP17.97■□□□□ 0.47
CCDC43-202ENST00000457422 FAM153BP0C7A2 387 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 ERVK-9P63128 1117 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 PRPF4BQ13523 1007 aaKnown RBP17.97■□□□□ 0.47
CCDC43-202ENST00000457422 EMC2Q15006 297 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 FAM153CQ494X1 144 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 DCAF12L1Q5VU92 463 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 TAF3Q5VWG9 929 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-202ENST00000457422 CYFIP1Q7L576 1253 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 BICD1Q96G01 975 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 KIAA1586Q9HCI6 787 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 FAM153AQ9UHL3 310 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 STYXL1Q9Y6J8 313 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 MIF4GDA9UHW6 222 aaKnown RBP17.97■□□□□ 0.47
CCDC43-202ENST00000457422 CYP26A1O43174 497 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 ATP4AP20648 1035 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 CLDN10P78369 228 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 FMO1Q01740 532 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 SV2AQ7L0J3 742 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 ENOSF1Q7L5Y1 443 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 FAM81BQ96LP2 452 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 NAP1L3Q99457 506 aaPredicted RBP17.97■□□□□ 0.47
CCDC43-202ENST00000457422 CTTNBP2NLQ9P2B4 639 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 FBXO40Q9UH90 709 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 ALG6Q9Y672 507 aa17.97■□□□□ 0.47
CCDC43-202ENST00000457422 IGKV6D-21A0A0A0MT36 114 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 KIAA0391O15091 583 aaKnown RBP17.96■□□□□ 0.47
CCDC43-202ENST00000457422 OATP04181 439 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 ITGA4P13612 1032 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 ECHS1P30084 290 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 ACTN2P35609 894 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 GCNT1Q02742 428 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 PPFIA1Q13136 1202 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 TRADDQ15628 312 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 PPP2R5EQ16537 467 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 C15orf39Q6ZRI6 1047 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 MAATS1Q7Z4T9 603 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 SLC47A2Q86VL8 602 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 IQCKQ8N0W5 287 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 ANKRD35Q8N283 1001 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 CCDC26Q8TAB7 109 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 MORC4Q8TE76 937 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 CNKSR2Q8WXI2 1034 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 SEC14L1Q92503 715 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 DDX47Q9H0S4 455 aaKnown RBP17.96■□□□□ 0.47
CCDC43-202ENST00000457422 DHX33Q9H6R0 707 aaKnown RBP17.96■□□□□ 0.47
CCDC43-202ENST00000457422 ACP6Q9NPH0 428 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 ZNF302Q9NR11 478 aa17.96■□□□□ 0.47
CCDC43-202ENST00000457422 ZNF233A6NK53 670 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 EXTL3O43909 919 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 RPS6KA5O75582 802 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 PIGRP01833 764 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 FGGP02679 453 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms