RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 ISCUQ9H1K1 167 aa14.6□□□□□ -0.07
TOP3B-213ENST00000457179 ATP8A1Q9Y2Q0 1164 aa14.6□□□□□ -0.07
TOP3B-213ENST00000457179 MAP3K13O43283 966 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 KRT16P08779 473 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 ATP2A2P16615 1042 aaKnown RBP14.59□□□□□ -0.07
TOP3B-213ENST00000457179 RANBP1P43487 201 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 BACE1P56817 501 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 RIPK1Q13546 671 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 LAMB3Q13751 1172 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 TRIM59Q8IWR1 403 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 RPUSD2Q8IZ73 545 aaKnown RBP14.59□□□□□ -0.07
TOP3B-213ENST00000457179 UHMK1Q8TAS1 419 aaKnown RBP14.59□□□□□ -0.07
TOP3B-213ENST00000457179 SYTL5Q8TDW5 730 aaPredicted RBP14.59□□□□□ -0.07
TOP3B-213ENST00000457179 TAF4BQ92750 862 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 KCTD10Q9H3F6 313 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 CEP72Q9P209 647 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 TRIM33Q9UPN9 1127 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 PCDHA2Q9Y5H9 948 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 SPDYE5A6NIY4 337 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 WDR46O15213 610 aaKnown RBP14.59□□□□□ -0.07
TOP3B-213ENST00000457179 PSMD10O75832 226 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 PTPRAP18433 802 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 HNRNPH3P31942 346 aaKnown RBP14.59□□□□□ -0.07
TOP3B-213ENST00000457179 MRPS9P82933 396 aaKnown RBP14.59□□□□□ -0.07
TOP3B-213ENST00000457179 SLMAPQ14BN4 828 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 ASIC2Q16515 512 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 COBLL1Q53SF7 1204 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 ERMARDQ5T6L9 678 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 OTUD5Q96G74 571 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 PRMT1Q99873 361 aaKnown RBP14.59□□□□□ -0.07
TOP3B-213ENST00000457179 EHMT1Q9H9B1 1298 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 ARMCX3Q9UH62 379 aaPredicted RBP14.59□□□□□ -0.07
TOP3B-213ENST00000457179 TSKSQ9UJT2 592 aa14.59□□□□□ -0.07
TOP3B-213ENST00000457179 A0A1B0GVG6 124 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 CFAP73A6NFT4 308 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 CCDC169A6NNP5 214 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 AHCYL1O43865 530 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 AKAP3O75969 853 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 FESP07332 822 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 PAEPP09466 180 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 CCND1P24385 295 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 PTGER2P43116 358 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 CDK17Q00537 523 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 ZNF268Q14587 947 aaPredicted RBP14.58□□□□□ -0.07
TOP3B-213ENST00000457179 FKBP1CQ5VVH2 108 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 USP38Q8NB14 1042 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 FAM84AQ96KN4 292 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 HSD17B14Q9BPX1 270 aa14.58□□□□□ -0.07
TOP3B-213ENST00000457179 VWA5AO00534 786 aa14.58□□□□□ -0.08
TOP3B-213ENST00000457179 TBC1D12O60347 775 aa14.58□□□□□ -0.08
TOP3B-213ENST00000457179 TRIM49P0CI25 452 aa14.58□□□□□ -0.08
TOP3B-213ENST00000457179 TRIM49CP0CI26 452 aa14.58□□□□□ -0.08
TOP3B-213ENST00000457179 PCK1P35558 622 aa14.58□□□□□ -0.08
TOP3B-213ENST00000457179 KNOP1Q1ED39 458 aaKnown RBP14.58□□□□□ -0.08
TOP3B-213ENST00000457179 AGBL2Q5U5Z8 902 aa14.58□□□□□ -0.08
TOP3B-213ENST00000457179 DCAF15Q66K64 600 aa14.58□□□□□ -0.08
TOP3B-213ENST00000457179 SLC17A8Q8NDX2 589 aa14.58□□□□□ -0.08
TOP3B-213ENST00000457179 MXRA8Q9BRK3 442 aa14.58□□□□□ -0.08
TOP3B-213ENST00000457179 PPP1R9AQ9ULJ8 1098 aa14.58□□□□□ -0.08
TOP3B-213ENST00000457179 SERPING1P05155 500 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 GSTA1P08263 222 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 NCALDP61601 193 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 CWF19L1Q69YN2 538 aaKnown RBP14.57□□□□□ -0.08
TOP3B-213ENST00000457179 GADL1Q6ZQY3 521 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 CLEC4DQ8WXI8 215 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 INPP4AQ96PE3 977 aaPredicted RBP14.57□□□□□ -0.08
TOP3B-213ENST00000457179 PARVGQ9HBI0 331 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 SLC38A10Q9HBR0 1119 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 SEPT11Q9NVA2 429 aaKnown RBP14.57□□□□□ -0.08
TOP3B-213ENST00000457179 RNF14Q9UBS8 474 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 AMACRQ9UHK6 382 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 TNS1Q9HBL0 1735 aaKnown RBP14.57□□□□□ -0.08
TOP3B-213ENST00000457179 GOLGA8IPA6NC78 632 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 GOLGA8JA6NMD2 632 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 SART1O43290 800 aaKnown RBP14.57□□□□□ -0.08
TOP3B-213ENST00000457179 RTN3O95197 1032 aaPredicted RBP14.57□□□□□ -0.08
TOP3B-213ENST00000457179 LUC7L3O95232 432 aaKnown RBP14.57□□□□□ -0.08
TOP3B-213ENST00000457179 TUBP50607 506 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 PTK2Q05397 1052 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 PDCD2Q16342 344 aaPredicted RBP14.57□□□□□ -0.08
TOP3B-213ENST00000457179 FAM102BQ5T8I3 360 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 SEPT14Q6ZU15 432 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 NAF1Q96HR8 494 aaKnown RBP14.57□□□□□ -0.08
TOP3B-213ENST00000457179 KIAA1683Q9H0B3 1180 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 PGAP2Q9UHJ9 254 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 LRRD1A4D1F6 860 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 K7ENM7 598 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 PIK3CDO00329 1044 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 XRCC5P13010 732 aaKnown RBP14.57□□□□□ -0.08
TOP3B-213ENST00000457179 CIITAP33076 1130 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 HOXD13P35453 343 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 ASTE1Q2TB18 679 aaPredicted RBP14.57□□□□□ -0.08
TOP3B-213ENST00000457179 TKFCQ3LXA3 575 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 TBC1D25Q3MII6 688 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 XKR9Q5GH70 373 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 PADI6Q6TGC4 694 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 B4GALNT2Q8NHY0 566 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 MGARPQ8TDB4 240 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 TEKT4Q8WW24 435 aa14.57□□□□□ -0.08
TOP3B-213ENST00000457179 ZBED3Q96IU2 234 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms