RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 FAM102BQ5T8I3 360 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 TRIM68Q6AZZ1 485 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 NXNQ6DKJ4 435 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 KCNV1Q6PIU1 500 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 TMCO3Q6UWJ1 677 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 UNC5AQ6ZN44 842 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 ANKS3Q6ZW76 656 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 NEK10Q6ZWH5 1172 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 USP51Q70EK9 711 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 CCDC80Q76M96 950 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.03□□□□□ -1.44
VPS41-209ENST00000457055 NLRP14Q86W24 1093 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 LSRQ86X29 649 aaPredicted RBP6.03□□□□□ -1.44
VPS41-209ENST00000457055 SLC44A2Q8IWA5 706 aaPredicted RBP6.03□□□□□ -1.44
VPS41-209ENST00000457055 RNF168Q8IYW5 571 aaPredicted RBP6.03□□□□□ -1.44
VPS41-209ENST00000457055 KRT222Q8N1A0 295 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 DCLK2Q8N568 766 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 PJA1Q8NG27 643 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 MGARPQ8TDB4 240 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 DHTKD1Q96HY7 919 aaPredicted RBP6.03□□□□□ -1.44
VPS41-209ENST00000457055 CLMNQ96JQ2 1002 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 ZDHHC15Q96MV8 337 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 FCRL3Q96P31 734 aaPredicted RBP6.03□□□□□ -1.44
VPS41-209ENST00000457055 BDH2Q9BUT1 245 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 UTP14AQ9BVJ6 771 aaKnown RBP6.03□□□□□ -1.44
VPS41-209ENST00000457055 CDH19Q9H159 772 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 ZNF408Q9H9D4 720 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 ZCCHC17Q9NP64 241 aaKnown RBP6.03□□□□□ -1.44
VPS41-209ENST00000457055 NLRC4Q9NPP4 1024 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 ATP8A2Q9NTI2 1148 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 ARGLU1Q9NWB6 273 aaPredicted RBP6.03□□□□□ -1.44
VPS41-209ENST00000457055 TMEM260Q9NX78 707 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 AIPL1Q9NZN9 384 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 SUSD2Q9UGT4 822 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 DBR1Q9UK59 544 aaKnown RBP6.03□□□□□ -1.44
VPS41-209ENST00000457055 C2CD2Q9Y426 696 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 ZNF451Q9Y4E5 1061 aa6.03□□□□□ -1.44
VPS41-209ENST00000457055 SYNDIG1LA6NDD5 238 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 M0QX08 132 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 SMC2O95347 1197 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 PLA2G1BP04054 148 aaKnown RBP6.02□□□□□ -1.45
VPS41-209ENST00000457055 ADRB1P08588 477 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 POU3F3P20264 500 aaPredicted RBP6.02□□□□□ -1.45
VPS41-209ENST00000457055 GUCY2CP25092 1073 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 L1CAMP32004 1257 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 RDXP35241 583 aaKnown RBP6.02□□□□□ -1.45
VPS41-209ENST00000457055 MXI1P50539 228 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 GUCY2FP51841 1108 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 RCAN1P53805 252 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 NUCB2P80303 420 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 PRR5P85299 388 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 FOXO4P98177 505 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 NFKB2Q00653 900 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 POU4F1Q01851 419 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 PIN1Q13526 163 aaPredicted RBP6.02□□□□□ -1.45
VPS41-209ENST00000457055 PSMD6Q15008 389 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 RASA2Q15283 850 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 ANKRD1Q15327 319 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 ELF2Q15723 593 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 VWA3BQ502W6 1294 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 DALRD3Q5D0E6 543 aaKnown RBP6.02□□□□□ -1.45
VPS41-209ENST00000457055 MCTP2Q6DN12 878 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 FAM180BQ6P0A1 224 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 PACS1Q6VY07 963 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 TOGARAM2Q6ZUX3 1019 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 GALNT5Q7Z7M9 940 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 PEX5LQ8IYB4 626 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 LILRB1Q8NHL6 650 aaPredicted RBP6.02□□□□□ -1.45
VPS41-209ENST00000457055 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.02□□□□□ -1.45
VPS41-209ENST00000457055 GPRASP2Q96D09 838 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 HIC2Q96JB3 615 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 TIGD1Q96MW7 591 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 DNAJC7Q99615 494 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 SH3GL1Q99961 368 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 SARGQ9BW04 601 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 RNF38Q9H0F5 515 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 TAOK3Q9H2K8 898 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 HELLSQ9NRZ9 838 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 SAGE1Q9NXZ1 904 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 PPT2Q9UMR5 302 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 TRAF3IP3Q9Y228 551 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 NOSIPQ9Y314 301 aaKnown RBP6.02□□□□□ -1.45
VPS41-209ENST00000457055 MRPL11Q9Y3B7 192 aaKnown RBP6.02□□□□□ -1.45
VPS41-209ENST00000457055 PMF1-BGLAPU3KQ54 211 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 ABCC1P33527 1531 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 JCADQ9P266 1359 aa6.02□□□□□ -1.45
VPS41-209ENST00000457055 AFF2P51816 1311 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 RNF123Q5XPI4 1314 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 ITIH6Q6UXX5 1313 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 RAD50Q92878 1312 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 ZC3H13Q5T200 1668 aaKnown RBP6.01□□□□□ -1.45
VPS41-209ENST00000457055 CDK13Q14004 1512 aaKnown RBP6.01□□□□□ -1.45
VPS41-209ENST00000457055 KIF14Q15058 1648 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 E2F8A0AVK6 867 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 TBKBP1A7MCY6 615 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 AKR1B15C9JRZ8 316 aaPredicted RBP6.01□□□□□ -1.45
VPS41-209ENST00000457055 TULP2O00295 520 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 KPNA6O60684 536 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 TADA3O75528 432 aa6.01□□□□□ -1.45
VPS41-209ENST00000457055 CNOT4O95628 575 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms