RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 IKZF4Q9H2S9 585 aa15.49■□□□□ 0.07
SMPD4-215ENST00000457039 FNDC1Q4ZHG4 1894 aaPredicted RBP15.48■□□□□ 0.07
SMPD4-215ENST00000457039 TMEM265A0A087WTH1 108 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 LINC01553A4QN01 128 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 HNRNPDLO14979 420 aaKnown RBP15.48■□□□□ 0.07
SMPD4-215ENST00000457039 INPPL1O15357 1258 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 KINO60870 393 aaKnown RBP15.48■□□□□ 0.07
SMPD4-215ENST00000457039 OFD1O75665 1012 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 PRPF6O94906 941 aaKnown RBP15.48■□□□□ 0.07
SMPD4-215ENST00000457039 RHOBTB3O94955 611 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 MCF2P10911 925 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 ITGA4P13612 1032 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 LIG4P49917 911 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 TAP1Q03518 808 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 MCL1Q07820 350 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 STK4Q13043 487 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 PSMD2Q13200 908 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 BMT2Q1RMZ1 405 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 ZNF568Q3ZCX4 644 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 KIAA0895Q8NCT3 520 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 ZNF507Q8TCN5 953 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 HELQQ8TDG4 1101 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 SCFD1Q8WVM8 642 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 RSPH1Q8WYR4 309 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 BICD1Q96G01 975 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 ACCSQ96QU6 501 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 SLC39A2Q9NP94 309 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 EXOC1Q9NV70 894 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 STYXL1Q9Y6J8 313 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 ZMYM2Q9UBW7 1377 aa15.48■□□□□ 0.07
SMPD4-215ENST00000457039 UBE4BO95155 1302 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 TBKBP1A7MCY6 615 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 TISP43B9A030 160 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 ANKRD63C9JTQ0 380 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 FAM189A1O60320 539 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 GRM5P41594 1212 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 AFF1P51825 1210 aaKnown RBP15.47■□□□□ 0.07
SMPD4-215ENST00000457039 BTG3Q14201 252 aaPredicted RBP15.47■□□□□ 0.07
SMPD4-215ENST00000457039 NOLC1Q14978 699 aaKnown RBP eCLIP15.47■□□□□ 0.073e-9■□□□□ 10.1
SMPD4-215ENST00000457039 LRRC55Q6ZSA7 311 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 STXBP4Q6ZWJ1 553 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 APBB1IPQ7Z5R6 666 aaPredicted RBP15.47■□□□□ 0.07
SMPD4-215ENST00000457039 SPRED2Q7Z698 418 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 ZBTB33Q86T24 672 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 HACE1Q8IYU2 909 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 CEP120Q8N960 986 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 GSTCDQ8NEC7 633 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 CLP1Q92989 425 aaKnown RBP15.47■□□□□ 0.07
SMPD4-215ENST00000457039 TTYH1Q9H313 450 aaPredicted RBP15.47■□□□□ 0.07
SMPD4-215ENST00000457039 TMEM206Q9H813 350 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 RSAD1Q9HA92 442 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 SLC28A3Q9HAS3 691 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 UBN1Q9NPG3 1134 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 SNTG2Q9NY99 539 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 ANKFY1Q9P2R3 1169 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 EXOC7Q9UPT5 735 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 GIT1Q9Y2X7 761 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 PCDHA5Q9Y5H7 936 aa15.47■□□□□ 0.07
SMPD4-215ENST00000457039 A0A0B4J269 797 aa15.46■□□□□ 0.07
SMPD4-215ENST00000457039 CLDN3O15551 220 aa15.46■□□□□ 0.07
SMPD4-215ENST00000457039 AKAP5P24588 427 aa15.46■□□□□ 0.07
SMPD4-215ENST00000457039 ADSSP30520 456 aa15.46■□□□□ 0.07
SMPD4-215ENST00000457039 PAN2Q504Q3 1202 aaKnown RBP15.46■□□□□ 0.07
SMPD4-215ENST00000457039 PPP2R2DQ66LE6 453 aa15.46■□□□□ 0.07
SMPD4-215ENST00000457039 GLB1LQ6UWU2 654 aa15.46■□□□□ 0.07
SMPD4-215ENST00000457039 FIBCD1Q8N539 461 aa15.46■□□□□ 0.07
SMPD4-215ENST00000457039 ERCC4Q92889 916 aaPredicted RBP15.46■□□□□ 0.07
SMPD4-215ENST00000457039 GSDMAQ96QA5 445 aa15.46■□□□□ 0.07
SMPD4-215ENST00000457039 TCHPQ9BT92 498 aa15.46■□□□□ 0.07
SMPD4-215ENST00000457039 APOL6Q9BWW8 343 aa15.46■□□□□ 0.07
SMPD4-215ENST00000457039 CWH43Q9H720 699 aa15.46■□□□□ 0.07
SMPD4-215ENST00000457039 HOOK1Q9UJC3 728 aaKnown RBP15.46■□□□□ 0.07
SMPD4-215ENST00000457039 MRPL42Q9Y6G3 142 aaKnown RBP15.46■□□□□ 0.07
SMPD4-215ENST00000457039 CDH23Q9H251 3354 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 ARL5CA6NH57 179 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 GOLGA6L22H0YM25 854 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 MEFVO15553 781 aaPredicted RBP15.45■□□□□ 0.06
SMPD4-215ENST00000457039 TGFB1I1O43294 461 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 RECQL4O94761 1208 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 ERVK-21P61565 698 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 NOMO2Q5JPE7 1267 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 TMEM192Q8IY95 271 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 ABI1Q8IZP0 508 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 LRRC43Q8N309 656 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 GPT2Q8TD30 523 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 CCDC47Q96A33 483 aaKnown RBP15.45■□□□□ 0.06
SMPD4-215ENST00000457039 ZFP42Q96MM3 310 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 GAD1Q99259 594 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 MRPL9Q9BYD2 267 aaKnown RBP15.45■□□□□ 0.06
SMPD4-215ENST00000457039 CXCL16Q9H2A7 254 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 ZNF576Q9H609 170 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 TYW1Q9NV66 732 aaKnown RBP15.45■□□□□ 0.06
SMPD4-215ENST00000457039 TBC1D13Q9NVG8 400 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 MIOSQ9NXC5 875 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 HCSTQ9UBK5 93 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 PARP2Q9UGN5 583 aa15.45■□□□□ 0.06
SMPD4-215ENST00000457039 SMC2O95347 1197 aa15.44■□□□□ 0.06
SMPD4-215ENST00000457039 HARSP12081 509 aaKnown RBP15.44■□□□□ 0.06
SMPD4-215ENST00000457039 MLH1P40692 756 aa15.44■□□□□ 0.06
SMPD4-215ENST00000457039 XKR4Q5GH76 650 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms