RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ZC2HC1CQ53FD0 456 aaPredicted RBP11.05□□□□□ -0.64
ATG4A-206ENST00000457035 EEF1DP3Q658K8 133 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 FAM178BQ8IXR5 827 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 CCDC65Q8IXS2 484 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 TARS2Q9BW92 718 aaKnown RBP11.05□□□□□ -0.64
ATG4A-206ENST00000457035 NKX2-4Q9H2Z4 354 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 PDZD7Q9H5P4 517 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 OLFML3Q9NRN5 406 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 LRFN2Q9ULH4 789 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 TBX20Q9UMR3 447 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 TNFSF13BQ9Y275 285 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 TDRD15B5MCY1 1934 aaKnown RBP11.05□□□□□ -0.64
ATG4A-206ENST00000457035 PHLPP2Q6ZVD8 1323 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 PRRC2BQ5JSZ5 2229 aaKnown RBP11.04□□□□□ -0.64
ATG4A-206ENST00000457035 PVALEFA0A1B0GWK0 134 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 MEIS3P2A8K0S8 358 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 ABLIM1O14639 778 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 PRPF40AO75400 957 aaKnown RBP11.04□□□□□ -0.64
ATG4A-206ENST00000457035 NR1I2O75469 434 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 CA3P07451 260 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 PROZP22891 400 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 GATMP50440 423 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 RAB27AP51159 221 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 ASIC1P78348 528 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 FAM160A1Q05DH4 1040 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 COASYQ13057 564 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 GRIN2CQ14957 1233 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 ATF7IP2Q5U623 682 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 SLC27A1Q6PCB7 646 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 AGMOQ6ZNB7 445 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 UNC13DQ70J99 1090 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 CNNM3Q8NE01 707 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 LPPQ93052 612 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 TIFAQ96CG3 184 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 CASD1Q96PB1 797 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 YME1L1Q96TA2 773 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 MRPL4Q9BYD3 311 aaKnown RBP11.04□□□□□ -0.64
ATG4A-206ENST00000457035 FGFBP2Q9BYJ0 223 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 MRPL44Q9H9J2 332 aaKnown RBP11.04□□□□□ -0.64
ATG4A-206ENST00000457035 TBC1D7Q9P0N9 293 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 IPPQ9Y573 584 aa11.04□□□□□ -0.64
ATG4A-206ENST00000457035 PRUNE2Q8WUY3 3088 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 TRANK1O15050 2925 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 KIAA1671Q9BY89 1806 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 TMEM265A0A087WTH1 108 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 LINC01553A4QN01 128 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 K7ENM7 598 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 N4BP3O15049 544 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 OFD1O75665 1012 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 NPTXRO95502 500 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 PIGRP01833 764 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 MYL1P05976 194 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 LINC00271P0C7V0 271 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 FGFR1P11362 822 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 IBSPP21815 317 aaPredicted RBP11.03□□□□□ -0.64
ATG4A-206ENST00000457035 CASP5P51878 434 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 UBE2HP62256 183 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 TAP1Q03518 808 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 KCNA1Q09470 495 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 DPYDQ12882 1025 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 STRN3Q13033 797 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 CLLU1OSQ5K130 101 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 KANK3Q6NY19 840 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 ZPBP2Q6X784 338 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 LRRC55Q6ZSA7 311 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 SPRED2Q7Z698 418 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 RNF169Q8NCN4 708 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 HPS3Q969F9 1004 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 ZBTB45Q96K62 511 aaPredicted RBP11.03□□□□□ -0.64
ATG4A-206ENST00000457035 TIGD1Q96MW7 591 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 TMEM117Q9H0C3 514 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 ZNF576Q9H609 170 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 SLC28A3Q9HAS3 691 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 HES2Q9Y543 173 aa11.03□□□□□ -0.64
ATG4A-206ENST00000457035 TCF20Q9UGU0 1960 aaKnown RBP11.03□□□□□ -0.64
ATG4A-206ENST00000457035 CUL9Q8IWT3 2517 aa11.02□□□□□ -0.64
ATG4A-206ENST00000457035 RALGAPA2Q2PPJ7 1873 aa11.02□□□□□ -0.64
ATG4A-206ENST00000457035 TBKBP1A7MCY6 615 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 HOXA2O43364 376 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 TOM1L1O75674 476 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 MYBP10242 640 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 ABCD1P33897 745 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 AFF1P51825 1210 aaKnown RBP11.02□□□□□ -0.65
ATG4A-206ENST00000457035 FOXK1P85037 733 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 BTG3Q14201 252 aaPredicted RBP11.02□□□□□ -0.65
ATG4A-206ENST00000457035 SLC39A4Q6P5W5 647 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 EPM2AIP1Q7L775 607 aaPredicted RBP11.02□□□□□ -0.65
ATG4A-206ENST00000457035 MAP4K3Q8IVH8 894 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 ELOA2Q8IYF1 753 aaPredicted RBP11.02□□□□□ -0.65
ATG4A-206ENST00000457035 CMTR2Q8IYT2 770 aaKnown RBP11.02□□□□□ -0.65
ATG4A-206ENST00000457035 FIBCD1Q8N539 461 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 GLIS3Q8NEA6 775 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 HELQQ8TDG4 1101 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 PPM1EQ8WY54 764 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 CLP1Q92989 425 aaKnown RBP11.02□□□□□ -0.65
ATG4A-206ENST00000457035 PGBD4Q96DM1 585 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 HAPLN2Q9GZV7 340 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 NXF3Q9H4D5 531 aaKnown RBP11.02□□□□□ -0.65
ATG4A-206ENST00000457035 LMBRD1Q9NUN5 540 aa11.02□□□□□ -0.65
ATG4A-206ENST00000457035 ANKRD63C9JTQ0 380 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms