RNA–Protein interactions for RNA: ENST00000456976.5

DDX39B-213, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-213ENST00000456976 ABHD15Q6UXT9 468 aa13.43□□□□□ -0.26
DDX39B-213ENST00000456976 KBTBD6Q86V97 674 aa13.43□□□□□ -0.26
DDX39B-213ENST00000456976 GLYCTKQ8IVS8 523 aa13.43□□□□□ -0.26
DDX39B-213ENST00000456976 CCDC60Q8IWA6 550 aaPredicted RBP13.43□□□□□ -0.26
DDX39B-213ENST00000456976 SMC5Q8IY18 1101 aa13.43□□□□□ -0.26
DDX39B-213ENST00000456976 GPR65Q8IYL9 337 aa13.43□□□□□ -0.26
DDX39B-213ENST00000456976 NCOA7Q8NI08 942 aa13.43□□□□□ -0.26
DDX39B-213ENST00000456976 ELSPBP1Q96BH3 223 aa13.43□□□□□ -0.26
DDX39B-213ENST00000456976 ZNF668Q96K58 619 aaPredicted RBP13.43□□□□□ -0.26
DDX39B-213ENST00000456976 GCOM2Q9BZD3 368 aaPredicted RBP13.43□□□□□ -0.26
DDX39B-213ENST00000456976 PLA2G2FQ9BZM2 168 aa13.43□□□□□ -0.26
DDX39B-213ENST00000456976 AGO4Q9HCK5 861 aaKnown RBP13.43□□□□□ -0.26
DDX39B-213ENST00000456976 FAM105AQ9NUU6 356 aa13.43□□□□□ -0.26
DDX39B-213ENST00000456976 GDE1Q9NZC3 331 aa13.43□□□□□ -0.26
DDX39B-213ENST00000456976 PRG3Q9Y2Y8 225 aaPredicted RBP13.43□□□□□ -0.26
DDX39B-213ENST00000456976 U3KPZ7 1027 aaPredicted RBP13.43□□□□□ -0.26
DDX39B-213ENST00000456976 EVPLQ92817 2033 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 B4GALT3O60512 393 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 SMARCA1P28370 1054 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 GPC3P51654 580 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 PTGDRQ13258 359 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 MIS18BP1Q6P0N0 1132 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 TRMT1LQ7Z2T5 733 aaKnown RBP13.42□□□□□ -0.26
DDX39B-213ENST00000456976 RAB11FIP4Q86YS3 637 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 NPAS3Q8IXF0 933 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 MB21D2Q8IYB1 491 aaPredicted RBP13.42□□□□□ -0.26
DDX39B-213ENST00000456976 MCRS1Q96EZ8 462 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 MAP3K14Q99558 947 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 LZTS2Q9BRK4 669 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 TRMT61BQ9BVS5 477 aaKnown RBP13.42□□□□□ -0.26
DDX39B-213ENST00000456976 SLC32A1Q9H598 525 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 CHST7Q9NS84 486 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 KLK13Q9UKR3 277 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 PIAS3Q9Y6X2 628 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 ADAMTS20P59510 1910 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 FREM2Q5SZK8 3169 aa13.42□□□□□ -0.26
DDX39B-213ENST00000456976 MEIS3P2A8K0S8 358 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 CCL16O15467 120 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 POMCP01189 267 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 ATP4AP20648 1035 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 SFPQP23246 707 aaKnown RBP eCLIP13.41□□□□□ -0.26
DDX39B-213ENST00000456976 HOXA9P31269 272 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 FGD1P98174 961 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 NUCB1Q02818 461 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 USP41Q3LFD5 358 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 PABPC1LQ4VXU2 614 aaKnown RBP13.41□□□□□ -0.26
DDX39B-213ENST00000456976 TANGO2Q6ICL3 276 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 TCEAL6Q6IPX3 200 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 C1orf228Q6PIY5 440 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 HEATR3Q7Z4Q2 680 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 RNF168Q8IYW5 571 aaPredicted RBP13.41□□□□□ -0.26
DDX39B-213ENST00000456976 LRRC71Q8N4P6 559 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 HNRNPLLQ8WVV9 542 aaKnown RBP13.41□□□□□ -0.26
DDX39B-213ENST00000456976 TCEAL3Q969E4 200 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 LRIG1Q96JA1 1093 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 MBOAT7Q96N66 472 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 INO80BQ9C086 356 aaPredicted RBP13.41□□□□□ -0.26
DDX39B-213ENST00000456976 TMEM9BQ9NQ34 198 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 TRPV5Q9NQA5 729 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 PIN4Q9Y237 131 aaKnown RBP13.41□□□□□ -0.26
DDX39B-213ENST00000456976 MRPS23Q9Y3D9 190 aaKnown RBP13.41□□□□□ -0.26
DDX39B-213ENST00000456976 MYH15Q9Y2K3 1946 aa13.41□□□□□ -0.26
DDX39B-213ENST00000456976 H0Y626 953 aa13.4□□□□□ -0.26
DDX39B-213ENST00000456976 CSDE1O75534 798 aaKnown RBP13.4□□□□□ -0.26
DDX39B-213ENST00000456976 TRIM16O95361 564 aa13.4□□□□□ -0.26
DDX39B-213ENST00000456976 C8AP07357 584 aa13.4□□□□□ -0.26
DDX39B-213ENST00000456976 CCNE1P24864 410 aa13.4□□□□□ -0.26
DDX39B-213ENST00000456976 CEP55Q53EZ4 464 aa13.4□□□□□ -0.26
DDX39B-213ENST00000456976 DGKKQ5KSL6 1271 aa13.4□□□□□ -0.26
DDX39B-213ENST00000456976 CCDC82Q8N4S0 544 aa13.4□□□□□ -0.26
DDX39B-213ENST00000456976 ZC3H10Q96K80 434 aaKnown RBP13.4□□□□□ -0.26
DDX39B-213ENST00000456976 COLEC11Q9BWP8 271 aa13.4□□□□□ -0.26
DDX39B-213ENST00000456976 RSAD1Q9HA92 442 aa13.4□□□□□ -0.26
DDX39B-213ENST00000456976 ZFP14Q9HCL3 533 aa13.4□□□□□ -0.26
DDX39B-213ENST00000456976 ZNF334Q9HCZ1 680 aaPredicted RBP13.4□□□□□ -0.26
DDX39B-213ENST00000456976 MARCH5Q9NX47 278 aa13.4□□□□□ -0.26
DDX39B-213ENST00000456976 CNTNAP2Q9UHC6 1331 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 CCDC163A0A0D9SF12 145 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 FAM221BA6H8Z2 402 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 AKAP3O75969 853 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 CAVIN2O95810 425 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 CAPNS1P04632 268 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 GNAQP50148 359 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 GRM2Q14416 872 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 TYW1BQ6NUM6 668 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 NFXL1Q6ZNB6 911 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 ZNF605Q86T29 641 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 DEFB124Q8NES8 71 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 ING5Q8WYH8 240 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 UBN1Q9NPG3 1134 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 DACH1Q9UI36 760 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 FBXW11Q9UKB1 542 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 PCDHB2Q9Y5E7 798 aa13.39□□□□□ -0.27
DDX39B-213ENST00000456976 MEIS1O00470 390 aa13.38□□□□□ -0.27
DDX39B-213ENST00000456976 SH2B2O14492 632 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-213ENST00000456976 PRC1O43663 620 aa13.38□□□□□ -0.27
DDX39B-213ENST00000456976 RHOBTB1O94844 696 aa13.38□□□□□ -0.27
DDX39B-213ENST00000456976 EFEMP2O95967 443 aa13.38□□□□□ -0.27
DDX39B-213ENST00000456976 IGHDP01880 384 aa13.38□□□□□ -0.27
DDX39B-213ENST00000456976 RPL17P18621 184 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms