RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.3□□□□□ -1.56
PCDH9-203ENST00000456367 SLC24A2Q9UI40 661 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 HAO1Q9UJM8 370 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 ACTL7BQ9Y614 415 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 VIRMAQ69YN4 1812 aaKnown RBP5.3□□□□□ -1.56
PCDH9-203ENST00000456367 PALM3A6NDB9 673 aaPredicted RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 LRRC10BA6NIK2 292 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 GOLGA8CPA6NN73 597 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 MGRN1O60291 552 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 SNX3O60493 162 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 SUPT3HO75486 399 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 UNC5CO95185 931 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 ZCCHC18P0CG32 403 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 PSEN1P49768 467 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 COPAP53621 1224 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 CTSWP56202 376 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 HERVK_113P62684 666 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 PDIA2Q13087 525 aaKnown RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 PTPAQ15257 358 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 TRIP13Q15645 432 aaPredicted RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 HIF1AQ16665 826 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 LONRF1Q17RB8 773 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 ZNF280DQ6N043 979 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 ZFP1Q6P2D0 407 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 OLFML1Q6UWY5 402 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 PARD3BQ8TEW8 1205 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 GPKOWQ92917 476 aaPredicted RBP eCLIP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 RPS6KC1Q96S38 1066 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 STRBPQ96SI9 672 aaKnown RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 RBM15Q96T37 977 aaKnown RBP eCLIP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 BEGAINQ9BUH8 593 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 STK33Q9BYT3 514 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 TRIM9Q9C026 710 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 STRIP2Q9ULQ0 834 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 LZTS1Q9Y250 596 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 MROH7-TTC4A0A0A0MT08 1334 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 SETBP1Q9Y6X0 1596 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 POTECB2RU33 542 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 M0R3G1 203 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 PDXKO00764 312 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 GSTA4O15217 222 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 TM9SF1O15321 606 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 CALB1P05937 261 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 VCAM1P19320 739 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 RPL5P46777 297 aaKnown RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 CCNHP51946 323 aaPredicted RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 KDSRQ06136 332 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 TBL3Q12788 808 aaKnown RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 PDAP1Q13442 181 aaKnown RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 MEA1Q16626 185 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 SLC45A4Q5BKX6 768 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 TTMPQ5BVD1 217 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 MIS18BP1Q6P0N0 1132 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 C1orf228Q6PIY5 440 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 TRIM74Q86UV6 250 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 TRIM73Q86UV7 250 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 CNBD1Q8NA66 436 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 RDH13Q8NBN7 331 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 HDAC11Q96DB2 347 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 MAGED4Q96JG8 741 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 DACH2Q96NX9 599 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 PRPF18Q99633 342 aaKnown RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 RIOK1Q9BRS2 568 aaKnown RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 TRIM51Q9BSJ1 452 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 EPS8L2Q9H6S3 715 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 KRT82Q9NSB4 513 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 TAGLN3Q9UI15 199 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 ANAPC7Q9UJX3 599 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 SORCS3Q9UPU3 1222 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 LRRC7Q96NW7 1537 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 C6orf229H3BNL8 230 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 RASSF9O75901 435 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 NR3C1P04150 777 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 KRT7P08729 469 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 DRD4P21917 467 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 KCNMA1Q12791 1236 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 KNOP1Q1ED39 458 aaKnown RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 EFHC1Q5JVL4 640 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 C4orf22Q6V702 233 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 RAPH1Q70E73 1250 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 LRRC6Q86X45 466 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 CALML6Q8TD86 181 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 NMD3Q96D46 503 aaKnown RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 VPS50Q96JG6 964 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 TEKT3Q9BXF9 490 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 FRMD8P1Q9BZ68 369 aaPredicted RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 KLHL25Q9H0H3 589 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 PUS7LQ9H0K6 701 aaKnown RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 IP6K2Q9UHH9 426 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 FAM153AQ9UHL3 310 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 STARD13Q9Y3M8 1113 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 AFG3L2Q9Y4W6 797 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 NRXN1Q9ULB1 1477 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 UNC13BO14795 1591 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 CHEK2O96017 543 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 FTLP02792 175 aaPredicted RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 OCM2P0CE71 109 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 OCMP0CE72 109 aaPredicted RBP5.29□□□□□ -1.56
PCDH9-203ENST00000456367 IMPDH2P12268 514 aa5.29□□□□□ -1.56
PCDH9-203ENST00000456367 COILP38432 576 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms