RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 TRIM29Q14134 588 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 TRIP13Q15645 432 aaPredicted RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 KIAA1755Q5JYT7 1200 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 MFSD4BQ5TF39 518 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PHLDB3Q6NSJ2 640 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 LRIG3Q6UXM1 1119 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 MTDHQ86UE4 582 aaKnown RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 RPUSD2Q8IZ73 545 aaKnown RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 ARFGAP2Q8N6H7 521 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 NMD3Q96D46 503 aaKnown RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 NMUR2Q9GZQ4 415 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PLAC1Q9HBJ0 212 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CWC25Q9NXE8 425 aaPredicted RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 DCTN4Q9UJW0 460 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PCDHA8Q9Y5H6 950 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 SCN11AQ9UI33 1791 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 NUMA1Q14980 2115 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 A8MU76 341 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 E9PMD0 336 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 ZFYP08048 801 aaPredicted RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 USP17L8P0C7I0 530 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 RPL13P26373 211 aaKnown RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 SPA17Q15506 151 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 MAN2A1Q16706 1144 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 METTL24Q5JXM2 366 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 MFSD5Q6N075 450 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 LMO3Q8TAP4 145 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CSRNP1Q96S65 589 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PCDHB18PQ96TA0 734 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 TIPINQ9BVW5 301 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 UBA5Q9GZZ9 404 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CUEDC2Q9H467 287 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 ARHGEF38Q9NXL2 777 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 DNMT3BQ9UBC3 853 aaKnown RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 NEU2Q9Y3R4 380 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PNPLA7Q6ZV29 1317 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CAMTA1Q9Y6Y1 1673 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PGRMC1O00264 195 aaKnown RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 TGFB1I1O43294 461 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PSMD7P51665 324 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PMS2P54278 862 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 IGBP1P78318 339 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PFKFB3Q16875 520 aaPredicted RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 LETM2Q2VYF4 491 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 KLHL35Q6PF15 583 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 NLRP10Q86W26 655 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CCDC25Q86WR0 208 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CLIP3Q96DZ5 547 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PCMTD1Q96MG8 357 aaPredicted RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 MTMR9Q96QG7 549 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 SH2D3AQ9BRG2 576 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 C10orf88Q9H8K7 445 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 DACH1Q9UI36 760 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 ABCC12Q96J65 1359 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CACNA1IQ9P0X4 2223 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 TMEM221A6NGB7 291 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 SFI1A8K8P3 1242 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 GRIN3BO60391 1043 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CIAO1O76071 339 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 RRM1P23921 792 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 HOXD11P31277 338 aaPredicted RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CCR3P51677 355 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 MLLT10P55197 1068 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 KLHL30Q0D2K2 578 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PEX6Q13608 980 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 ITIH4Q14624 930 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 COG2Q14746 738 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 ATP13A4Q4VNC1 1196 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 MEX3CQ5U5Q3 659 aaKnown RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 LPCAT4Q643R3 524 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 USP17L2Q6R6M4 530 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 GUF1Q8N442 669 aaKnown RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 EIF1ADQ8N9N8 165 aaKnown RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 SLC35G2Q8TBE7 412 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 HSPH1Q92598 858 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 C7orf25Q9BPX7 421 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 ZMYND12Q9H0C1 365 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 ZFYVE28Q9HCC9 887 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 TTC3P53804 2025 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 TTC36A6NLP5 189 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 FSCN2O14926 492 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 TOM1O60784 492 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 CFHP08603 1231 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 PABPC4LP0CB38 370 aaKnown RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 IMPDH2P12268 514 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 CYP11B2P19099 503 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 ADRA1DP25100 572 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 PCK1P35558 622 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 KRT2P35908 639 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 YBX1P67809 324 aaKnown RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 MXRA7P84157 204 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 ACAP1Q15027 740 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 ACAP2Q15057 778 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 PKN2Q16513 984 aaKnown RBP4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 EPC2Q52LR7 807 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 TCERG1LQ5VWI1 586 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 TRIM22Q8IYM9 498 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 NEK9Q8TD19 979 aa4.86□□□□□ -1.63
DEPDC1-202ENST00000456315 ADAMTS6Q9UKP5 1117 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms