RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 PTPRAP18433 802 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 CALB2P22676 271 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 CIITAP33076 1130 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 CD97P48960 835 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 BACE1P56817 501 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 CDKAL1Q5VV42 579 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 SPATA1Q5VX52 437 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 ASRGL1Q7L266 308 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.19□□□□□ -1.1
HDAC9-218ENST00000456174 EIF1ADQ8N9N8 165 aaKnown RBP8.19□□□□□ -1.1
HDAC9-218ENST00000456174 ETNPPLQ8TBG4 499 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 CPLX3Q8WVH0 158 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 LARP4BQ92615 738 aaKnown RBP8.19□□□□□ -1.1
HDAC9-218ENST00000456174 LENG9Q96B70 501 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 IQCDQ96DY2 449 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 IFT74Q96LB3 600 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 XPO6Q96QU8 1125 aaKnown RBP8.19□□□□□ -1.1
HDAC9-218ENST00000456174 C7orf25Q9BPX7 421 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 TRIM9Q9C026 710 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 RHBDL2Q9NX52 303 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 TUBA8Q9NY65 449 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-218ENST00000456174 CTTNBP2NLQ9P2B4 639 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 CNOT8Q9UFF9 292 aaKnown RBP8.19□□□□□ -1.1
HDAC9-218ENST00000456174 CTNND2Q9UQB3 1225 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 PLAAQ9Y263 795 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 NFS1Q9Y697 457 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 SSC5DA1L4H1 1573 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 A8MUI8 341 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 KRT38O76015 456 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 RHOBTB3O94955 611 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 FAM153BP0C7A2 387 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 TMOD1P28289 359 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 HOXD12P35452 270 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 KRT9P35527 623 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 CCT6AP40227 531 aaKnown RBP8.19□□□□□ -1.1
HDAC9-218ENST00000456174 ASIC1P78348 528 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 CNPY1Q3B7I2 92 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 SUPT20HL1Q3ZLR7 823 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 FAM153CQ494X1 144 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 TMEM119Q4V9L6 283 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 CCDC122Q5T0U0 273 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 DAB2IPQ5VWQ8 1189 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 ENDOVQ8N8Q3 282 aaKnown RBP8.19□□□□□ -1.1
HDAC9-218ENST00000456174 ZNF280CQ8ND82 737 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 ASAP3Q8TDY4 903 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 SH3TC2Q8TF17 1288 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 RAD54LQ92698 747 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 KLRG1Q96E93 195 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 DDX27Q96GQ7 796 aaKnown RBP8.19□□□□□ -1.1
HDAC9-218ENST00000456174 FAM20AQ96MK3 541 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 MFRPQ9BY79 579 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 RPAP3Q9H6T3 665 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-218ENST00000456174 ECT2Q9H8V3 914 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 EHMT1Q9H9B1 1298 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 ADARB2Q9NS39 739 aaKnown RBP8.19□□□□□ -1.1
HDAC9-218ENST00000456174 FAM153AQ9UHL3 310 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 ZNF148Q9UQR1 794 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 GDAQ9Y2T3 454 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 ZHX2Q9Y6X8 837 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 RLFQ13129 1914 aa8.19□□□□□ -1.1
HDAC9-218ENST00000456174 MROH7Q68CQ1 1323 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 PITPNM2Q9BZ72 1349 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 BIRC5O15392 142 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 MSH4O15457 936 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 KRT86O43790 486 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 ATP9BO43861 1147 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 TROVE2P10155 538 aaKnown RBP eCLIP8.18□□□□□ -1.1
HDAC9-218ENST00000456174 PRCPP42785 496 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 GSTM4Q03013 218 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 MCL1Q07820 350 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 BNIP1Q12981 228 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 PAK1Q13153 545 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 PRKG1Q13976 671 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 ECM1Q16610 540 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 SEPT14Q6ZU15 432 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 KCNK18Q7Z418 384 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 CPXCR1Q8N123 301 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 CYP2W1Q8TAV3 490 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 DNAJC9Q8WXX5 260 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 NT5C3AQ9H0P0 336 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 SLC38A10Q9HBR0 1119 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 RAVER2Q9HCJ3 691 aaKnown RBP8.18□□□□□ -1.1
HDAC9-218ENST00000456174 HSFX1Q9UBD0 423 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 RWDD2AQ9UIY3 292 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 PPP1R9AQ9ULJ8 1098 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 LRCH1Q9Y2L9 728 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 CTDP1Q9Y5B0 961 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-218ENST00000456174 WDR90Q96KV7 1748 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 KDM3AQ9Y4C1 1321 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 IGLV3-22A0A075B6J6 115 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 TMEM247A6NEH6 219 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 UBOX5O94941 541 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 IDEP14735 1019 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 STAT3P40763 770 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 UBXN2AP68543 259 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 KRT83P78385 493 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 PDE4DQ08499 809 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 SPIRE1Q08AE8 756 aa8.18□□□□□ -1.1
HDAC9-218ENST00000456174 FAM133BQ5BKY9 247 aaKnown RBP8.18□□□□□ -1.1
HDAC9-218ENST00000456174 HYIQ5T013 277 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms