RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 FDXACB1Q9BRP7 624 aaPredicted RBP17.56■□□□□ 0.4
TMEM220-202ENST00000455996 FAM213AQ9BRX8 229 aa17.56■□□□□ 0.4
TMEM220-202ENST00000455996 MSTO1Q9BUK6 570 aa17.56■□□□□ 0.4
TMEM220-202ENST00000455996 ADAMTS10Q9H324 1103 aa17.56■□□□□ 0.4
TMEM220-202ENST00000455996 XPNPEP3Q9NQH7 507 aa17.56■□□□□ 0.4
TMEM220-202ENST00000455996 MYO6Q9UM54 1294 aa17.56■□□□□ 0.4
TMEM220-202ENST00000455996 PLAGL2Q9UPG8 496 aa17.56■□□□□ 0.4
TMEM220-202ENST00000455996 TNFSF13BQ9Y275 285 aa17.56■□□□□ 0.4
TMEM220-202ENST00000455996 LRRIQ3A6PVS8 624 aaPredicted RBP17.55■□□□□ 0.4
TMEM220-202ENST00000455996 INO80B-WBP1J3KQ70 363 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 CLDN3O15551 220 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 VTNP04004 478 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 GNAT1P11488 350 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 NLRP11P59045 1033 aaKnown RBP17.55■□□□□ 0.4
TMEM220-202ENST00000455996 MYL7Q01449 175 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 TSR1Q2NL82 804 aaKnown RBP17.55■□□□□ 0.4
TMEM220-202ENST00000455996 MPZL3Q6UWV2 235 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 CCAR2Q8N163 923 aaKnown RBP17.55■□□□□ 0.4
TMEM220-202ENST00000455996 RAET1EQ8TD07 263 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 INO80BQ9C086 356 aaPredicted RBP17.55■□□□□ 0.4
TMEM220-202ENST00000455996 GCNT4Q9P109 453 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 COQ4Q9Y3A0 265 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 CNTNAP2Q9UHC6 1331 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 C17orf102A2RUQ5 167 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 PGK1P00558 417 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 IQCF3P0C7M6 154 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 UCHL3P15374 230 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 PRPF4BQ13523 1007 aaKnown RBP17.55■□□□□ 0.4
TMEM220-202ENST00000455996 EPC2Q52LR7 807 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 ATF7IP2Q5U623 682 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 SLAIN1Q8ND83 568 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 EHBP1Q8NDI1 1231 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 TMEM117Q9H0C3 514 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 INTS2Q9H0H0 1204 aaKnown RBP17.55■□□□□ 0.4
TMEM220-202ENST00000455996 ZNHIT6Q9NWK9 470 aaKnown RBP17.55■□□□□ 0.4
TMEM220-202ENST00000455996 HDAC6Q9UBN7 1215 aa17.55■□□□□ 0.4
TMEM220-202ENST00000455996 EVPLQ92817 2033 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 SCN10AQ9Y5Y9 1956 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 SOWAHDA6NJG2 315 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 OGTO15294 1046 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 GPR32O75388 356 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 CYP2C9P11712 490 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 ACTN1P12814 892 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 POLR2FP61218 127 aaKnown RBP17.54■□□□□ 0.4
TMEM220-202ENST00000455996 POU5F1Q01860 360 aaKnown RBP17.54■□□□□ 0.4
TMEM220-202ENST00000455996 CETN1Q12798 172 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 PCBP1Q15365 356 aaKnown RBP eCLIP17.54■□□□□ 0.4
TMEM220-202ENST00000455996 TRIM65Q6PJ69 517 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 RAD9BQ6WBX8 426 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 RUFY4Q6ZNE9 571 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 CACNA2D4Q7Z3S7 1137 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 SESTD1Q86VW0 696 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 C7orf31Q8N865 590 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 TMEM8AQ9HCN3 771 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 ANKFY1Q9P2R3 1169 aa17.54■□□□□ 0.4
TMEM220-202ENST00000455996 DDX20Q9UHI6 824 aaKnown RBP17.54■□□□□ 0.4
TMEM220-202ENST00000455996 LRRC53A6NM62 1247 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 TREHO43280 583 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 B4GALT5O43286 388 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 CCP110O43303 1012 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 RFX1P22670 979 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 GCLMP48507 274 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 MXI1P50539 228 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 APBA1Q02410 837 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 KRT39Q6A163 491 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 CXCL17Q6UXB2 119 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 C15orf39Q6ZRI6 1047 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 RRAGAQ7L523 313 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 BRSK2Q8IWQ3 736 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 NME8Q8N427 588 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 NLRP7Q8WX94 980 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 ZNF668Q96K58 619 aaPredicted RBP17.53■□□□□ 0.4
TMEM220-202ENST00000455996 CHP1Q99653 195 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 AIPL1Q9NZN9 384 aa17.53■□□□□ 0.4
TMEM220-202ENST00000455996 CPSF3Q9UKF6 684 aaKnown RBP17.53■□□□□ 0.4
TMEM220-202ENST00000455996 ACOT2P49753 483 aa17.52■□□□□ 0.4
TMEM220-202ENST00000455996 JAM2P57087 298 aa17.52■□□□□ 0.4
TMEM220-202ENST00000455996 NBPF20Q3BBV1 942 aa17.52■□□□□ 0.4
TMEM220-202ENST00000455996 ZBTB41Q5SVQ8 909 aa17.52■□□□□ 0.4
TMEM220-202ENST00000455996 EEF1DP3Q658K8 133 aa17.52■□□□□ 0.4
TMEM220-202ENST00000455996 TAF2Q6P1X5 1199 aa17.52■□□□□ 0.4
TMEM220-202ENST00000455996 CCDC170Q8IYT3 715 aa17.52■□□□□ 0.4
TMEM220-202ENST00000455996 PCSK9Q8NBP7 692 aaKnown RBP17.52■□□□□ 0.4
TMEM220-202ENST00000455996 CCDC127Q96BQ5 260 aa17.52■□□□□ 0.4
TMEM220-202ENST00000455996 GCOM2Q9BZD3 368 aaPredicted RBP17.52■□□□□ 0.4
TMEM220-202ENST00000455996 CDT1Q9H211 546 aa17.52■□□□□ 0.4
TMEM220-202ENST00000455996 RBAKQ9NYW8 714 aaPredicted RBP17.52■□□□□ 0.4
TMEM220-202ENST00000455996 GTF2IRD1Q9UHL9 959 aa17.52■□□□□ 0.4
TMEM220-202ENST00000455996 FHOD1Q9Y613 1164 aa17.52■□□□□ 0.4
TMEM220-202ENST00000455996 KAT6AQ92794 2004 aa17.51■□□□□ 0.39
TMEM220-202ENST00000455996 USP27XA6NNY8 438 aa17.51■□□□□ 0.39
TMEM220-202ENST00000455996 ZSCAN12O43309 604 aa17.51■□□□□ 0.39
TMEM220-202ENST00000455996 TSPAN1O60635 241 aa17.51■□□□□ 0.39
TMEM220-202ENST00000455996 MCF2P10911 925 aa17.51■□□□□ 0.39
TMEM220-202ENST00000455996 MATR3P43243 847 aaKnown RBP eCLIP17.51■□□□□ 0.39
TMEM220-202ENST00000455996 CHMP4BP1P59074 171 aa17.51■□□□□ 0.39
TMEM220-202ENST00000455996 ZNF200P98182 395 aaPredicted RBP17.51■□□□□ 0.39
TMEM220-202ENST00000455996 MAP2K1Q02750 393 aaPredicted RBP17.51■□□□□ 0.39
TMEM220-202ENST00000455996 MTF1Q14872 753 aa17.51■□□□□ 0.39
TMEM220-202ENST00000455996 KCNA10Q16322 511 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms