RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 TMEM134Q9H6X4 195 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 C17orf75Q9HAS0 396 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 PTPRHQ9HD43 1115 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 CD320Q9NPF0 282 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 SRPRBQ9Y5M8 271 aaKnown RBP13.06□□□□□ -0.32
TMEM56-202ENST00000455656 C2orf71A6NGG8 1288 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 F8W810 466 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 PROZP22891 400 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 UBA7P41226 1012 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 NASPP49321 788 aaPredicted RBP13.05□□□□□ -0.32
TMEM56-202ENST00000455656 KRT17Q04695 432 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 RNASELQ05823 741 aaKnown RBP13.05□□□□□ -0.32
TMEM56-202ENST00000455656 PKP1Q13835 747 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 MCM6Q14566 821 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 SLC39A14Q15043 492 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 NAB2Q15742 525 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 PTCRAQ6ISU1 281 aaPredicted RBP13.05□□□□□ -0.32
TMEM56-202ENST00000455656 DDX53Q86TM3 631 aaKnown RBP13.05□□□□□ -0.32
TMEM56-202ENST00000455656 HSCBQ8IWL3 235 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 TMEM161BQ8NDZ6 487 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 SPIRE2Q8WWL2 714 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 RAD54LQ92698 747 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 KCNN1Q92952 543 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 TMEM169Q96HH4 297 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 FIZ1Q96SL8 496 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 ACO2Q99798 780 aaKnown RBP13.05□□□□□ -0.32
TMEM56-202ENST00000455656 TRIM6Q9C030 488 aaPredicted RBP13.05□□□□□ -0.32
TMEM56-202ENST00000455656 TLE6Q9H808 572 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 NGRNQ9NPE2 291 aaKnown RBP13.05□□□□□ -0.32
TMEM56-202ENST00000455656 SNTG2Q9NY99 539 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 KCND2Q9NZV8 630 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 KLK14Q9P0G3 267 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 KANSL3Q9P2N6 904 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 PUF60Q9UHX1 559 aaKnown RBP13.05□□□□□ -0.32
TMEM56-202ENST00000455656 BARX2Q9UMQ3 279 aaPredicted RBP13.05□□□□□ -0.32
TMEM56-202ENST00000455656 TNFSF13BQ9Y275 285 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 IRAK3Q9Y616 596 aa13.05□□□□□ -0.32
TMEM56-202ENST00000455656 ANK1P16157 1881 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 A0A087X0B3 334 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 CARNS1A5YM72 827 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 CCDC169A6NNP5 214 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 K7ERI5 159 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 SLC16A4O15374 487 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 MEFVO15553 781 aaPredicted RBP13.04□□□□□ -0.32
TMEM56-202ENST00000455656 MBTPS2O43462 519 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 RECQL4O94761 1208 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 SSBP05455 408 aaKnown RBP eCLIP13.04□□□□□ -0.32
TMEM56-202ENST00000455656 CTSAP10619 480 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 PLS3P13797 630 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 LIG1P18858 919 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 ZNF131P52739 623 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 NCKAP1LP55160 1127 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 CEBPZQ03701 1054 aaKnown RBP13.04□□□□□ -0.32
TMEM56-202ENST00000455656 DMP1Q13316 513 aaPredicted RBP13.04□□□□□ -0.32
TMEM56-202ENST00000455656 ATF7IP2Q5U623 682 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 TMEM184AQ6ZMB5 413 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 TMC7Q7Z402 723 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 FAM178BQ8IXR5 827 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 CEP120Q8N960 986 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 MRPL43Q8N983 215 aaKnown RBP13.04□□□□□ -0.32
TMEM56-202ENST00000455656 LINC00301Q8NCQ3 95 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 MICAL1Q8TDZ2 1067 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 AUTS2Q8WXX7 1259 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 PPP2R3CQ969Q6 453 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 CALML4Q96GE6 196 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 CDK5RAP3Q96JB5 506 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 CDCA3Q99618 268 aaPredicted RBP13.04□□□□□ -0.32
TMEM56-202ENST00000455656 REEP2Q9BRK0 252 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 CDT1Q9H211 546 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 KMT5AQ9NQR1 393 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 ENTPD7Q9NQZ7 604 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 CACNG4Q9UBN1 327 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 DENND4AQ7Z401 1863 aa13.04□□□□□ -0.32
TMEM56-202ENST00000455656 TNFRSF10AO00220 468 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 LILRB3O75022 631 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 CLASP2O75122 1294 aaKnown RBP13.03□□□□□ -0.32
TMEM56-202ENST00000455656 MAPTP10636 758 aaKnown RBP13.03□□□□□ -0.32
TMEM56-202ENST00000455656 GRIK3Q13003 919 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 COASYQ13057 564 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 GIT2Q14161 759 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 SMC1AQ14683 1233 aaKnown RBP13.03□□□□□ -0.32
TMEM56-202ENST00000455656 PTPN14Q15678 1187 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 CLUL1Q15846 466 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 PUS10Q3MIT2 529 aaKnown RBP13.03□□□□□ -0.32
TMEM56-202ENST00000455656 DCAF4L1Q3SXM0 396 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 EP400NLQ6ZTU2 488 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 TAS1R1Q7RTX1 841 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 GPBP1Q86WP2 473 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 VPS52Q8N1B4 723 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 SMRP1Q8NCR6 262 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 LARP4BQ92615 738 aaKnown RBP13.03□□□□□ -0.32
TMEM56-202ENST00000455656 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.321e-7■■■□□ 15
TMEM56-202ENST00000455656 PAAF1Q9BRP4 392 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 TARS2Q9BW92 718 aaKnown RBP13.03□□□□□ -0.32
TMEM56-202ENST00000455656 PARP2Q9UGN5 583 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 CD207Q9UJ71 328 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 ODF2LQ9ULJ1 636 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 FAN1Q9Y2M0 1017 aa13.03□□□□□ -0.32
TMEM56-202ENST00000455656 RBM19Q9Y4C8 960 aaKnown RBP13.03□□□□□ -0.32
TMEM56-202ENST00000455656 MTCL1Q9Y4B5 1905 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms