RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 TRPC6Q9Y210 931 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 KRT5P13647 590 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 MAGEA9P43362 315 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 LIG3P49916 1009 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 MTMR3Q13615 1198 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 PTGISQ16647 500 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 KRT39Q6A163 491 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 SAMD7Q7Z3H4 446 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 NLRX1Q86UT6 975 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 UHMK1Q8TAS1 419 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 ZNF564Q8TBZ8 553 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 PARD3BQ8TEW8 1205 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 SEC14L1Q92503 715 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 TATDN2Q93075 761 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 MAGOHBQ96A72 148 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 DIS3Q9Y2L1 958 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 PTPN22Q9Y2R2 807 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 SMIM23A6NLE4 172 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 E7EVH7 732 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 ZNF862O60290 1169 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 PYGMP11217 842 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 MFAP3P55082 362 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 KRT76Q01546 638 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 MAP3K10Q02779 954 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 C11orf63Q6NUN7 778 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 SLC39A4Q6P5W5 647 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 PRELID2Q8N945 189 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 BICD1Q96G01 975 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 TMEM51Q9NW97 253 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 EXOC7Q9UPT5 735 aa13.16□□□□□ -0.3
SEMA4D-213ENST00000455551 ADGRA3Q8IWK6 1321 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 SYNGAP1Q96PV0 1343 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 HNRNPDLO14979 420 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 CYP11B1P15538 503 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 SEL1L2Q5TEA6 688 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 DUPD1Q68J44 220 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 TTC27Q6P3X3 843 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 FBXO25Q8TCJ0 367 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 CAMKK2Q96RR4 588 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 IWS1Q96ST2 819 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 EPN3Q9H201 632 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 VWA5AO00534 786 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 PDE6CP51160 858 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 MAGOHP61326 146 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 MAP4K3Q8IVH8 894 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 HELQQ8TDG4 1101 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 SHC3Q92529 594 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 NT5C1BQ96P26 610 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 ST6GALNAC4Q9H4F1 302 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 TNS1Q9HBL0 1735 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 PFASO15067 1338 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 MIF4GDA9UHW6 222 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 PHF2O75151 1096 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 SHBGP04278 402 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 NR3C2P08235 984 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 KCNJ1P48048 391 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 C2CD6Q53TS8 623 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 UBAP2Q5T6F2 1119 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 NBPF12Q5TAG4 269 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 SWSAP1Q6NVH7 229 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 RUFY4Q6ZNE9 571 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 MICALL1Q8N3F8 863 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 ZKSCAN4Q969J2 545 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 FAM213AQ9BRX8 229 aa13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 MOV10L1Q9BXT6 1211 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 CNOT8Q9UFF9 292 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 SEPT9Q9UHD8 586 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-213ENST00000455551 SFNP31947 248 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 SNRNP48Q6IEG0 339 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 FBXL13Q8NEE6 735 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 JDP2Q8WYK2 163 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 TMEM8AQ9HCN3 771 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 ANKEF1Q9NU02 776 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 PCDHA10Q9Y5I2 948 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 FER1L6Q2WGJ9 1857 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 SV2AQ7L0J3 742 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 NLRP14Q86W24 1093 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 ZNF473Q8WTR7 871 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 CCT8L2Q96SF2 557 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 ZDHHC18Q9NUE0 388 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 RAB20Q9NX57 234 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 TLDC2A0PJX2 215 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 A6NNZ2 444 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 KIAA0391O15091 583 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 PEX5P50542 639 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 HADHBP55084 474 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 GHRHRQ02643 423 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 TUBB8Q3ZCM7 444 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 LLGL2Q6P1M3 1020 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 CCDC137Q6PK04 289 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 MYCBPAPQ8TBZ2 947 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 TRIM7Q9C029 511 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 RASAL2Q9UJF2 1139 aa13.14□□□□□ -0.31
SEMA4D-213ENST00000455551 DOCK5Q9H7D0 1870 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 CTNND1O60716 968 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 PPFIA2O75334 1257 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 ERLIN2O94905 339 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 RPL21P46778 160 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 CYP24A1Q07973 514 aa13.13□□□□□ -0.31
SEMA4D-213ENST00000455551 ZDHHC24Q6UX98 284 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms