RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CCL16O15467 120 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CCNT1O60563 726 aaKnown RBP6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 USO1O60763 962 aaKnown RBP6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 KIF4AO95239 1232 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 EDN1P05305 212 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ADH1AP07327 375 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ITGA4P13612 1032 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ARF4P18085 180 aaPredicted RBP6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 LIG1P18858 919 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CD72P21854 359 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CYP3A7P24462 503 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 QARSP47897 775 aaKnown RBP6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 USP11P51784 963 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 MBTD1Q05BQ5 628 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 DSC1Q08554 894 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SSRP1Q08945 709 aaKnown RBP6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SPIRE1Q08AE8 756 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PPP2R5CQ13362 524 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 AMHR2Q16671 573 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GLRA4Q5JXX5 417 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PARM1Q6UWI2 310 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CENPQQ7L2Z9 268 aaPredicted RBP6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GRASPQ7Z6J2 395 aaPredicted RBP6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 FERMT3Q86UX7 667 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PPFIBP1Q86W92 1011 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TMEM130Q8N3G9 435 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 DAGLBQ8NCG7 672 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 RDM1Q8NG50 284 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PIGOQ8TEQ8 1089 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 FGF14Q92915 247 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PGBD4Q96DM1 585 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 KIFC3Q9BVG8 833 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 AGXT2Q9BYV1 514 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TRIM6Q9C030 488 aaPredicted RBP6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 POLR3FQ9H1D9 316 aaPredicted RBP6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PIDD1Q9HB75 910 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 WDR6Q9NNW5 1121 aaKnown RBP6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 HCFC1R1Q9NWW0 138 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 POLIQ9UNA4 740 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 MTCL1Q9Y4B5 1905 aaKnown RBP6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CNOT1A5YKK6 2376 aaKnown RBP6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CCDC194A0A1B0GVG4 234 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 LRRIQ4A6NIV6 560 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 I3L4J1 428 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ZNF623O75123 536 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 DEXIO95424 95 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 LARGE1O95461 756 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SRFP11831 508 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SKIP12755 728 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NCLP19338 710 aaKnown RBP6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GLRA2P23416 452 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 HOXC13P31276 330 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 DSG1Q02413 1049 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SCRN1Q12765 414 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SNW1Q13573 536 aaKnown RBP6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GIT2Q14161 759 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 KIAA0319Q5VV43 1072 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NOTUMQ6P988 496 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TSSK4Q6SA08 328 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 C15orf39Q6ZRI6 1047 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 KRT25Q7Z3Z0 450 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 MRPL10Q7Z7H8 261 aaKnown RBP6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NEK8Q86SG6 692 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CEP57Q86XR8 500 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TPH2Q8IWU9 490 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 MAML2Q8IZL2 1156 aaPredicted RBP6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PLCD3Q8N3E9 789 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SLC44A3Q8N4M1 653 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GSTCDQ8NEC7 633 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PJA1Q8NG27 643 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ITFG1Q8TB96 612 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SLC7A14Q8TBB6 771 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 BSNDQ8WZ55 320 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 MTRQ99707 1265 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TMEM175Q9BSA9 504 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 IRF2BPLQ9H1B7 796 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SH3GLB2Q9NR46 395 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 DLGAP2Q9P1A6 1054 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 EPS15L1Q9UBC2 864 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PARP2Q9UGN5 583 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 MTF2Q9Y483 593 aaPredicted RBP6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TRIP11Q15643 1979 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CNTNAP2Q9UHC6 1331 aa6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 KMT2BQ9UMN6 2715 aaPredicted RBP6.67□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SDK1Q7Z5N4 2213 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TICRRQ7Z2Z1 1910 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PTGESO14684 152 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 MARCH6O60337 910 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 RECQL4O94761 1208 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CTDNEP1O95476 244 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 LMNAP02545 664 aaKnown RBP6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 C8AP07357 584 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SP9P0CG40 484 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 LAMP2P13473 410 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 FSHRP23945 695 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 RFC5P40937 340 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NUBP1P53384 320 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PTENP60484 403 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GPC5P78333 572 aa6.66□□□□□ -1.34
HLA-DPA3-207ENST00000454398 UBXN2BQ14CS0 331 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms