RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 STK24Q9Y6E0 443 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 GPR37L1O60883 481 aa18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 EPCAMP16422 314 aa18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 CBX2Q14781 532 aaPredicted RBP18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 PTPN14Q15678 1187 aa18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 EEF1DP3Q658K8 133 aa18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 LARP1BQ659C4 914 aaKnown RBP18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 KANK3Q6NY19 840 aa18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 TAS1R1Q7RTX1 841 aa18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 C12orf76Q8N812 135 aaPredicted RBP18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 RABGGTAQ92696 567 aa18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 KIFAP3Q92845 792 aa18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 IFT74Q96LB3 600 aa18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 PHF7Q9BWX1 381 aaPredicted RBP18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 CACNG4Q9UBN1 327 aa18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 IRAK3Q9Y616 596 aa18.16■□□□□ 0.5
NCKIPSD-208ENST00000454134 TDRD15B5MCY1 1934 aaKnown RBP18.15■□□□□ 0.5
NCKIPSD-208ENST00000454134 VWA3AA6NCI4 1184 aa18.15■□□□□ 0.5
NCKIPSD-208ENST00000454134 LOC730098B7Z3J9 87 aa18.15■□□□□ 0.5
NCKIPSD-208ENST00000454134 ACKR2O00590 384 aa18.15■□□□□ 0.5
NCKIPSD-208ENST00000454134 C2CD2LO14523 706 aa18.15■□□□□ 0.5
NCKIPSD-208ENST00000454134 N4BP3O15049 544 aa18.15■□□□□ 0.5
NCKIPSD-208ENST00000454134 HOXB8P17481 243 aaPredicted RBP18.15■□□□□ 0.5
NCKIPSD-208ENST00000454134 SP100P23497 879 aaPredicted RBP18.15■□□□□ 0.5
NCKIPSD-208ENST00000454134 GIT2Q14161 759 aa18.15■□□□□ 0.5
NCKIPSD-208ENST00000454134 SLC22A17Q8WUG5 538 aa18.15■□□□□ 0.5
NCKIPSD-208ENST00000454134 PLIN2Q99541 437 aa18.15■□□□□ 0.5
NCKIPSD-208ENST00000454134 RUSC1Q9BVN2 902 aa18.15■□□□□ 0.5
NCKIPSD-208ENST00000454134 SNTG2Q9NY99 539 aa18.15■□□□□ 0.5
NCKIPSD-208ENST00000454134 HIP1RO75146 1068 aa18.14■□□□□ 0.49
NCKIPSD-208ENST00000454134 CNPP09543 421 aaKnown RBP18.14■□□□□ 0.49
NCKIPSD-208ENST00000454134 WEE2P0C1S8 567 aa18.14■□□□□ 0.49
NCKIPSD-208ENST00000454134 PEX3P56589 373 aa18.14■□□□□ 0.49
NCKIPSD-208ENST00000454134 TPRNQ4KMQ1 711 aa18.14■□□□□ 0.49
NCKIPSD-208ENST00000454134 RARS2Q5T160 578 aaKnown RBP18.14■□□□□ 0.49
NCKIPSD-208ENST00000454134 NT5DC1Q5TFE4 455 aa18.14■□□□□ 0.49
NCKIPSD-208ENST00000454134 DAW1Q8N136 415 aa18.14■□□□□ 0.49
NCKIPSD-208ENST00000454134 PNMA5Q96PV4 448 aa18.14■□□□□ 0.49
NCKIPSD-208ENST00000454134 RPS6KC1Q96S38 1066 aa18.14■□□□□ 0.49
NCKIPSD-208ENST00000454134 CXCL16Q9H2A7 254 aa18.14■□□□□ 0.49
NCKIPSD-208ENST00000454134 CCDC169A6NNP5 214 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 LILRB3O75022 631 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 RECQL4O94761 1208 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 SOD2P04179 222 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 NPTX2P47972 431 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 EFNA5P52803 228 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 GRIK3Q13003 919 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 RINT1Q6NUQ1 792 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 FEZF2Q8TBJ5 459 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 KLHL5Q96PQ7 755 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 ADPGKQ9BRR6 497 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 HERC2P3Q9BVR0 1158 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 COLEC11Q9BWP8 271 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 EMILIN2Q9BXX0 1053 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 ADAM7Q9H2U9 754 aa18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 MRPL17Q9NRX2 175 aaKnown RBP18.13■□□□□ 0.49
NCKIPSD-208ENST00000454134 SFI1A8K8P3 1242 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 K7ERI5 159 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 NR1I2O75469 434 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 URODP06132 367 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 KLRC2P26717 231 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 RAD51AP2Q09MP3 1159 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 MAPK7Q13164 816 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 CUL4AQ13619 759 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 HERC4Q5GLZ8 1057 aaPredicted RBP18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 ATF7IP2Q5U623 682 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 CES5AQ6NT32 575 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 C1orf186Q6ZWK4 172 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 B3GALT6Q96L58 329 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 PAAF1Q9BRP4 392 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 POMKQ9H5K3 350 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 TSHZ2Q9NRE2 1034 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 STK39Q9UEW8 545 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 GDAQ9Y2T3 454 aa18.12■□□□□ 0.49
NCKIPSD-208ENST00000454134 PTGESO14684 152 aa18.11■□□□□ 0.49
NCKIPSD-208ENST00000454134 EFEMP2O95967 443 aa18.11■□□□□ 0.49
NCKIPSD-208ENST00000454134 GLUD2P49448 558 aa18.11■□□□□ 0.49
NCKIPSD-208ENST00000454134 HYIQ5T013 277 aa18.11■□□□□ 0.49
NCKIPSD-208ENST00000454134 ARL6IP4Q66PJ3 421 aaKnown RBP18.11■□□□□ 0.49
NCKIPSD-208ENST00000454134 CABP7Q86V35 215 aa18.11■□□□□ 0.49
NCKIPSD-208ENST00000454134 PPFIBP1Q86W92 1011 aa18.11■□□□□ 0.49
NCKIPSD-208ENST00000454134 RNF168Q8IYW5 571 aaPredicted RBP18.11■□□□□ 0.49
NCKIPSD-208ENST00000454134 DRC1Q96MC2 740 aa18.11■□□□□ 0.49
NCKIPSD-208ENST00000454134 GPR62Q9BZJ7 368 aa18.11■□□□□ 0.49
NCKIPSD-208ENST00000454134 DZANK1Q9NVP4 752 aa18.11■□□□□ 0.49
NCKIPSD-208ENST00000454134 ZMYM2Q9UBW7 1377 aa18.11■□□□□ 0.49
NCKIPSD-208ENST00000454134 VPS37CA5D8V6 355 aaPredicted RBP18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 CASTOR2A6NHX0 329 aa18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 PRR33A8MZF0 331 aa18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 MYBP10242 640 aa18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 CLCN4P51793 760 aa18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 ITIH3Q06033 890 aa18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 DMP1Q13316 513 aaPredicted RBP18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 KIAA0319Q5VV43 1072 aa18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 KIAA1841Q6NSI8 718 aa18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 FUT10Q6P4F1 479 aa18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 TMC5Q6UXY8 1006 aa18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 HASPINQ8TF76 798 aa18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 CDK5RAP3Q96JB5 506 aa18.1■□□□□ 0.49
NCKIPSD-208ENST00000454134 FBXL18Q96ME1 805 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms