RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 PRMT7Q9NVM4 692 aaPredicted RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 GTF2IRD1Q9UHL9 959 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 AGO2Q9UKV8 859 aaKnown RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 TNFSF13BQ9Y275 285 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 PTPN22Q9Y2R2 807 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 DNAH12Q6ZR08 3092 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 CNTNAP2Q9UHC6 1331 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 ZNF233A6NK53 670 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 LRRIQ3A6PVS8 624 aaPredicted RBP6.53□□□□□ -1.36
SDC4P-201ENST00000453285 ESPNB1AK53 854 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 TOM1L1O75674 476 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 LDHAP00338 332 aaKnown RBP6.53□□□□□ -1.36
SDC4P-201ENST00000453285 GNAT1P11488 350 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 ACTN1P12814 892 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 KRT13P13646 458 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 ARF4P18085 180 aaPredicted RBP6.53□□□□□ -1.36
SDC4P-201ENST00000453285 SFPQP23246 707 aaKnown RBP eCLIP6.53□□□□□ -1.36
SDC4P-201ENST00000453285 KRT9P35527 623 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 ACOT2P49753 483 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 ACLYP53396 1101 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 CDC42EP1Q00587 391 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 APBA1Q02410 837 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 TMEM62Q0P6H9 643 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 PRPF4BQ13523 1007 aaKnown RBP6.53□□□□□ -1.36
SDC4P-201ENST00000453285 PSMD6Q15008 389 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 KIZQ2M2Z5 673 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 EPC2Q52LR7 807 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 DCAF17Q5H9S7 520 aaPredicted RBP6.53□□□□□ -1.36
SDC4P-201ENST00000453285 ATF7IP2Q5U623 682 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 TCERG1LQ5VWI1 586 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 WDR59Q6PJI9 974 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 GBP6Q6ZN66 633 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 C15orf39Q6ZRI6 1047 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 RPAINQ86UA6 219 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 NME8Q8N427 588 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 C7orf31Q8N865 590 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 PCSK9Q8NBP7 692 aaKnown RBP6.53□□□□□ -1.36
SDC4P-201ENST00000453285 KIAA1524Q8TCG1 905 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 SH3TC2Q8TF17 1288 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 BAP1Q92560 729 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 ZNF516Q92618 1163 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 WNT8BQ93098 351 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 CCDC51Q96ER9 411 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 PRIMPOLQ96LW4 560 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 MAP7D2Q96T17 732 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 POP1Q99575 1024 aaKnown RBP6.53□□□□□ -1.36
SDC4P-201ENST00000453285 DNAJC7Q99615 494 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 FAM213AQ9BRX8 229 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 TSEN34Q9BSV6 310 aaKnown RBP6.53□□□□□ -1.36
SDC4P-201ENST00000453285 CRACR2AQ9BSW2 395 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 LSM14BQ9BX40 385 aaKnown RBP6.53□□□□□ -1.36
SDC4P-201ENST00000453285 EDEM3Q9BZQ6 932 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 TMEM117Q9H0C3 514 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 FAM49AQ9H0Q0 323 aaPredicted RBP6.53□□□□□ -1.36
SDC4P-201ENST00000453285 CDT1Q9H211 546 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 MMRN2Q9H8L6 949 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 KIAA1586Q9HCI6 787 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 PLCB1Q9NQ66 1216 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 ABHD10Q9NUJ1 306 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 COQ4Q9Y3A0 265 aa6.53□□□□□ -1.36
SDC4P-201ENST00000453285 A0A1B0GUA9 196 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 MOXD2PA6NHM9 499 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 RBAK-RBAKDNI3L0D1 243 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 OGTO15294 1046 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 P4HA2O15460 535 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 CLDN3O15551 220 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 MEFVO15553 781 aaPredicted RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 STX10O60499 249 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 TSPAN1O60635 241 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 LRRN2O75325 713 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 CABYRO75952 493 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 C4BPAP04003 597 aaKnown RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 SKILP12757 684 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 DARSP14868 501 aaKnown RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 TRIM21P19474 475 aaKnown RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 FGFR4P22455 802 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 HOXA11P31270 313 aaPredicted RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 HNRNPH3P31942 346 aaKnown RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 GTF2H1P32780 548 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 TNFSF9P41273 254 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 GCLMP48507 274 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 CRYBB1P53674 252 aaPredicted RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 ZBED6P86452 979 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 MGAT3Q09327 533 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 ITGA7Q13683 1181 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 SNX17Q15036 470 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 MEA1Q16626 185 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 EXOC3L4Q17RC7 722 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 SEZ6Q53EL9 994 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 KLHDC7AQ5VTJ3 777 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 E4F1Q66K89 784 aaPredicted RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 TAF2Q6P1X5 1199 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 MPZL3Q6UWV2 235 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 ZBTB33Q86T24 672 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 RNF180Q86T96 592 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 SERINC5Q86VE9 423 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 CDR2LQ86X02 465 aaPredicted RBP6.52□□□□□ -1.37
SDC4P-201ENST00000453285 CNGA4Q8IV77 575 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 BRSK2Q8IWQ3 736 aa6.52□□□□□ -1.37
SDC4P-201ENST00000453285 ZNF710Q8N1W2 664 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms