RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 CRLF3Q8IUI8 442 aa8.24□□□□□ -1.09
RIF1-206ENST00000453091 GLI1P08151 1106 aa8.24□□□□□ -1.09
RIF1-206ENST00000453091 ACOT2P49753 483 aa8.24□□□□□ -1.09
RIF1-206ENST00000453091 RGS7P49802 495 aa8.24□□□□□ -1.09
RIF1-206ENST00000453091 FAXCQ5TGI0 409 aa8.24□□□□□ -1.09
RIF1-206ENST00000453091 ST13P4Q8IZP2 240 aaPredicted RBP8.24□□□□□ -1.09
RIF1-206ENST00000453091 SEMA6BQ9H3T3 888 aa8.24□□□□□ -1.09
RIF1-206ENST00000453091 ELP3Q9H9T3 547 aa8.24□□□□□ -1.09
RIF1-206ENST00000453091 WDR19Q8NEZ3 1342 aa8.24□□□□□ -1.09
RIF1-206ENST00000453091 GRAP2O75791 330 aa8.24□□□□□ -1.09
RIF1-206ENST00000453091 ITGA8P53708 1063 aa8.24□□□□□ -1.09
RIF1-206ENST00000453091 GRB10Q13322 594 aa8.24□□□□□ -1.09
RIF1-206ENST00000453091 RASSF3Q86WH2 238 aa8.24□□□□□ -1.09
RIF1-206ENST00000453091 CHMP2BQ9UQN3 213 aa8.24□□□□□ -1.09
RIF1-206ENST00000453091 NTSR2O95665 410 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 CDR2Q01850 454 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 SLC29A2Q14542 456 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 TRAPPC11Q7Z392 1133 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 USP33Q8TEY7 942 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 SNRNP27Q8WVK2 155 aaKnown RBP8.23□□□□□ -1.09
RIF1-206ENST00000453091 POLR3FQ9H1D9 316 aaPredicted RBP8.23□□□□□ -1.09
RIF1-206ENST00000453091 RNF146Q9NTX7 359 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 TMEM51Q9NW97 253 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 IRAK4Q9NWZ3 460 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 L1RE1Q9UN81 338 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 ITIH6Q6UXX5 1313 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 hCG_1984214I3L0E3 225 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 TTC4O95801 387 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 PSAPP07602 524 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 NLRP11P59045 1033 aaKnown RBP8.23□□□□□ -1.09
RIF1-206ENST00000453091 EVX2Q03828 476 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 KIF19Q2TAC6 998 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 ZNF713Q8N859 430 aaPredicted RBP8.23□□□□□ -1.09
RIF1-206ENST00000453091 SNX25Q9H3E2 840 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 MRPL42Q9Y6G3 142 aaKnown RBP8.23□□□□□ -1.09
RIF1-206ENST00000453091 UBE4BO95155 1302 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 A0A087X0T9 212 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 FAM228BP0C875 321 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 POU5F1BQ06416 359 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 SMTNL2Q2TAL5 461 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 ANO4Q32M45 955 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 BARGINQ6ZT62 677 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 TMEM143Q96AN5 459 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 FGD4Q96M96 766 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 MIF4GDA9UHW6 222 aaKnown RBP8.23□□□□□ -1.09
RIF1-206ENST00000453091 K7ERI5 159 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 ATP9BO43861 1147 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 RNASELQ05823 741 aaKnown RBP8.23□□□□□ -1.09
RIF1-206ENST00000453091 PPP4R3CPQ6ZMV5 832 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 FAM193BQ96PV7 902 aaPredicted RBP8.23□□□□□ -1.09
RIF1-206ENST00000453091 NOD2Q9HC29 1040 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 PTPRUQ92729 1446 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 GSTA4O15217 222 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 CALCAP01258 141 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 KCNB1Q14721 858 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 SAMD7Q7Z3H4 446 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 SLITRK6Q9H5Y7 841 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 ZNF711Q9Y462 761 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 TJP3O95049 919 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 PGM1P36871 562 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 SESN2P58004 480 aaPredicted RBP8.23□□□□□ -1.09
RIF1-206ENST00000453091 PSMC1P62191 440 aaKnown RBP8.23□□□□□ -1.09
RIF1-206ENST00000453091 YWHAHQ04917 246 aaPredicted RBP8.23□□□□□ -1.09
RIF1-206ENST00000453091 MTMR2Q13614 643 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 PRPSAP1Q14558 356 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 COG2Q14746 738 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 R3HDM1Q15032 1099 aaKnown RBP8.23□□□□□ -1.09
RIF1-206ENST00000453091 TMEM179Q6ZVK1 233 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 RNF168Q8IYW5 571 aaPredicted RBP8.23□□□□□ -1.09
RIF1-206ENST00000453091 MMGT1Q8N4V1 131 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 MADDQ8WXG6 1647 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 GLI2P10070 1586 aa8.23□□□□□ -1.09
RIF1-206ENST00000453091 FAM187AA6NFU0 413 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 OATP04181 439 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 MYBL2P10244 700 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 ITGA4P13612 1032 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 RCSD1Q6JBY9 416 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 RBM43Q6ZSC3 357 aaKnown RBP8.22□□□□□ -1.09
RIF1-206ENST00000453091 NUDCD3Q8IVD9 361 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 OSGEPQ9NPF4 335 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 APOBEC2Q9Y235 224 aaKnown RBP8.22□□□□□ -1.09
RIF1-206ENST00000453091 USP20Q9Y2K6 914 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 PHF2O75151 1096 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 SGPL1O95470 568 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 ZNF34Q8IZ26 560 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 TSEN2Q8NCE0 465 aaKnown RBP8.22□□□□□ -1.09
RIF1-206ENST00000453091 GIMAP8Q8ND71 665 aaPredicted RBP8.22□□□□□ -1.09
RIF1-206ENST00000453091 CCHCR1Q8TD31 782 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 AGBL1Q96MI9 1066 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 ACAP3Q96P50 834 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 ADA2Q9NZK5 511 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 ARHGAP20Q9P2F6 1191 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 BCAP29Q9UHQ4 241 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 KRT3P12035 628 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 RASA1P20936 1047 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 NME3Q13232 169 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 CYB5D1Q6P9G0 228 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 RSBN1LQ6PCB5 846 aaPredicted RBP8.22□□□□□ -1.09
RIF1-206ENST00000453091 HAUS6Q7Z4H7 955 aa8.22□□□□□ -1.09
RIF1-206ENST00000453091 PROM2Q8N271 834 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms