RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PLS1Q14651 629 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 RASA2Q15283 850 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 SF3B3Q15393 1217 aaKnown RBP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 SF1Q15637 639 aaKnown RBP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 TIGD6Q17RP2 521 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 INF2Q27J81 1249 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 TMEM177Q53S58 311 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 ODF2Q5BJF6 829 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 FBXO47Q5MNV8 452 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 KRT74Q7RTS7 529 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 SPRED2Q7Z698 418 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 TRIM59Q8IWR1 403 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 NAT8LQ8N9F0 302 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 AVL9Q8NBF6 648 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 TOR1AIP2Q8NFQ8 470 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 TDRD7Q8NHU6 1098 aaKnown RBP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 PPP1R14CQ8TAE6 165 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 LMBR1Q8WVP7 490 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 BRI3BPQ8WY22 251 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 HTRA1Q92743 480 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 MRGPRX3Q96LB0 322 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 C7orf26Q96N11 449 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 PYM1Q9BRP8 204 aaKnown RBP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 UNKQ9C0B0 810 aaKnown RBP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 ARHGAP39Q9C0H5 1083 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 XAB2Q9HCS7 855 aaKnown RBP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 PREBQ9HCU5 417 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 DCP1AQ9NPI6 582 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 PIH1D1Q9NWS0 290 aaKnown RBP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 OXSMQ9NWU1 459 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 ADGRE2Q9UHX3 823 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 VAV3Q9UKW4 847 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 SRPK3Q9UPE1 567 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 COQ6Q9Y2Z9 468 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 ZNF711Q9Y462 761 aa4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 MTF2Q9Y483 593 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P21-201ENST00000452483 PI4KAP2A4QPH2 592 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 TMEM110-MUSTN1A8MSY1 372 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 CHURC1-FNTBB4DL54 471 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 AKR1B10O60218 316 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 RTN3O95197 1032 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 KCNH1O95259 989 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 PAPLNO95428 1278 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 SNRPB2P08579 225 aaKnown RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 ZNF865P0CJ78 1059 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 SRGAP2CP0DJJ0 459 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 CD8BP10966 210 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 HARSP12081 509 aaKnown RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 MYF5P13349 255 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 ALOX15P16050 662 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 ATP5DP30049 168 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 MC4RP32245 332 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 CD96P40200 585 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 HNF4AP41235 474 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 HSPA7P48741 367 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 POLD2P49005 469 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 SEPHS1P49903 392 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 CLCN7P51798 805 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 GFRA1P56159 465 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 AP1B1Q10567 949 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 BNIP3Q12983 259 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 BECN1Q14457 450 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 SMAD2Q15796 467 aaKnown RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 NKPD1Q17RQ9 610 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 FAM110CQ1W6H9 321 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 SETMARQ53H47 684 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 SFRP5Q5T4F7 317 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 GPR139Q6DWJ6 353 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 STYK1Q6J9G0 422 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 JMJD6Q6NYC1 403 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 TATDN1Q6P1N9 297 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 C16orf87Q6PH81 154 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 LMBR1LQ6UX01 489 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 C22orf34Q6ZV56 151 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 CREG2Q8IUH2 290 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 MCATQ8IVS2 390 aaKnown RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 SLC44A2Q8IWA5 706 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 TMEM192Q8IY95 271 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 CCDC144CPQ8IYA2 1237 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 PHACTR4Q8IZ21 702 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 MFSD4AQ8N468 514 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 EFHBQ8N7U6 833 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 SIMC1Q8NDZ2 872 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 SPATA18Q8TC71 538 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 DCAF4Q8WV16 495 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 RSAD2Q8WXG1 361 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 RFFLQ8WZ73 363 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 RUBCNQ92622 972 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 BRF1Q92994 677 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 LRFN3Q9BTN0 628 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 RANBP17Q9H2T7 1088 aaKnown RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 NOL6Q9H6R4 1146 aaKnown RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 CNTD2Q9H8S5 307 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 PNPLA8Q9NP80 782 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 KIF17Q9P2E2 1029 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 RASAL2Q9UJF2 1139 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 ARHGAP26Q9UNA1 814 aa4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 C19orf53Q9UNZ5 99 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P21-201ENST00000452483 RSF1Q96T23 1441 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms